Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31710
         (435 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0604 + 30536172-30537143                                         33   0.10 
07_03_0480 + 18567759-18567956,18568140-18569226,18570025-18570380     30   0.94 
03_02_0197 + 6337212-6337278,6339261-6340517,6340599-6340626,634...    27   6.6  
04_03_0407 - 15542495-15543247                                         27   8.7  

>01_06_0604 + 30536172-30537143
          Length = 323

 Score = 33.1 bits (72), Expect = 0.10
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +3

Query: 111 TRXNAMVQGPYTCEQQASRTPTSVLCKVNEVSPRNSSKEARPGGG-KT*S*TSNKLEQAN 287
           TR  A V GP      +SR  TS  C+ +   PR S+  A   GG      +S+  E   
Sbjct: 208 TRARASVSGPCRAPPPSSRRGTSQSCRYSFELPRGSTASAATDGGFAVVKRSSDPYEDFR 267

Query: 288 KDLEE 302
           K +EE
Sbjct: 268 KSMEE 272


>07_03_0480 + 18567759-18567956,18568140-18569226,18570025-18570380
          Length = 546

 Score = 29.9 bits (64), Expect = 0.94
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 235 GRASLLELRGLTSFTLHSTEVGVLLACCSQVYGPCTMALXLVPAYIA 95
           G A   E  G  +  +H TEVG L  C   ++G C++   L+P  +A
Sbjct: 334 GLALYRETAGYVNPAVHKTEVGNLQEC---MFGRCSLVFKLMPRSVA 377


>03_02_0197 +
           6337212-6337278,6339261-6340517,6340599-6340626,
           6340735-6340897
          Length = 504

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 223 LLELRGLTSFTLHSTEVGVLLA 158
           L ++ G+ ++TLH T  GVLLA
Sbjct: 335 LFDMNGIPAYTLHLTGSGVLLA 356


>04_03_0407 - 15542495-15543247
          Length = 250

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 153 VRRCTXLVPWHCXLXQLTSPAYSXLDTRT 67
           ++ CT   PW+  L   T P  + LD  T
Sbjct: 202 LKNCTTPTPWYAWLFPWTDPCTTYLDNTT 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,466,569
Number of Sequences: 37544
Number of extensions: 195007
Number of successful extensions: 611
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 826450812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)