Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31708
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   2.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.5  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.5  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 432 PSSERPQRTRVETTNSPAGSRLPSVSTS 349
           PS   PQ +    + SPA    P VS +
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAA 67


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 432 PSSERPQRTRVETTNSPAGSRLPSVSTS 349
           PS   PQ +    + SPA    P VS +
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAA 67


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 302 HNGXKKTDKHPPKNWGDVDTLGN-LDPAG 385
           H+G  K+D      W DV + G+ LD +G
Sbjct: 175 HHGGIKSDSVTSNAWWDVHSTGSWLDMSG 203


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 182 LLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPII 292
           + D I SGV   D+G  I   + E   V   + +  I
Sbjct: 315 IYDAIHSGVVRGDNGQNIPLTEFEGIDVLGNIIESSI 351


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 234 IPTPESKFSTPDWMQSRRVDP 172
           +P P+    T  WMQ +R  P
Sbjct: 187 VPQPQPVLPTYKWMQVKRNVP 207


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 234 IPTPESKFSTPDWMQSRRVDP 172
           +P P+    T  WMQ +R  P
Sbjct: 187 VPQPQPVLPTYKWMQVKRNVP 207


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 234 IPTPESKFSTPDWMQSRRVDP 172
           +P P+    T  WMQ +R  P
Sbjct: 187 VPQPQPVLPTYKWMQVKRNVP 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,544
Number of Sequences: 336
Number of extensions: 2162
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)