Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31708
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 34 0.078
09_03_0215 + 13524418-13524465,13524856-13525171,13525291-135253... 31 0.42
01_01_0663 - 5059881-5060119,5060682-5060898,5061008-5061838,506... 30 1.3
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 29 1.7
03_05_0447 - 24421442-24422767 29 1.7
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 29 2.2
10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294... 29 2.2
04_04_0437 + 25193263-25194627 28 3.9
04_03_0999 - 21600231-21600788,21600896-21601056,21601149-216012... 28 3.9
01_05_0204 + 19246633-19246938,19247091-19247192,19247314-192474... 28 3.9
11_04_0137 + 13909204-13909315,13910002-13910999,13911058-139112... 28 5.1
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506... 28 5.1
02_05_1309 + 35627549-35627679,35628377-35629361 28 5.1
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 28 5.1
03_05_0908 + 28686855-28687328 27 6.8
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 27 8.9
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,101915-102151,
102559-102590,102993-103047,103384-103498,104497-104579,
105182-105232,105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 33.9 bits (74), Expect = 0.078
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 176 STLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGXK 316
S LLD + E D +++PD+ + VF+++ +P+++D G K
Sbjct: 103 SKLLDPKRGRTEVFDGFSSVFSPDSSQHDVFSQVMNPLVDDLLLGGK 149
>09_03_0215 +
13524418-13524465,13524856-13525171,13525291-13525352,
13526352-13527063,13527847-13527863
Length = 384
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 514 LEAGQGAGDLVLHLLXXXLGEAGVEGVPLERAAAAHAGGDHELAGG 377
+E G GA +LVL +L +G G P R A GG+ E A G
Sbjct: 249 VEEGPGADELVLVVLQHVVGVGRGGGAPAGRDEGAADGGEREAARG 294
>01_01_0663 -
5059881-5060119,5060682-5060898,5061008-5061838,
5063560-5064120
Length = 615
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 505 GQGAGDLVLHLLXXXLGEAGVEGVPLERAAAAHAGGDHELAGGVEVAE 362
G G GDL++H + GV RAAAA GG + +E+ E
Sbjct: 65 GGGGGDLLVHRCVLSARSPFLRGVFARRAAAAAGGGGEDGGERLELRE 112
>07_01_0893 +
7484598-7484744,7484837-7484902,7494387-7494530,
7494860-7495235,7495904-7496017,7496282-7496454,
7496562-7496669,7497311-7497377,7497791-7497904,
7498121-7498257,7498727-7498813,7498962-7498986,
7499044-7499266,7499770-7499947,7500039-7500152,
7500249-7500380,7500488-7500588,7500720-7500933
Length = 839
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 SARKAATMVDAATLEKLEAG-FSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 193
S K + + + +++ + G F K D S + K+ TRE+ D+ K + +LDC
Sbjct: 94 SVWKGGMIKEYSKMDECKTGDFGKRPLIDDISTVCKWFTRELSDTTYGKNAQLAAKVLDC 153
Query: 194 I 196
+
Sbjct: 154 V 154
>03_05_0447 - 24421442-24422767
Length = 441
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 DGCSSARKAATMVDAATLEKLEAGFSKLQG-SDSK 106
DGC S+ ++ AA L +LEAG K G SD++
Sbjct: 63 DGCGSSGAGDALLAAAALARLEAGLRKRTGDSDAR 97
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -1
Query: 177 DPNEVFLFFRLSNTSLVRYFFSSDLE-SDPWSLLKPASNFSRVAASTIVAAFLA 19
D +++ L + LV YF+ SD SLL SNF+R+A+ + ++ F++
Sbjct: 139 DASKLALKHTRAGAPLVAYFWDKTFAWSDASSLLPFCSNFTRLASQSTMSGFVS 192
>10_08_1063 -
22628642-22628716,22628806-22629012,22629325-22629433,
22629547-22629657,22630466-22630513,22630636-22630713,
22632151-22632254,22632360-22632470,22632555-22632791
Length = 359
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 418 PLARGVPLQPLPHRVPXQGDGGQGLRHPVQP 510
P+ RG Q PH++ + D G G+++P P
Sbjct: 322 PMQRGAGAQSHPHQLRRKADQGMGMQNPGYP 352
>04_04_0437 + 25193263-25194627
Length = 454
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 155 NKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELF 280
N TS GS D I+ G N+D YAP+ S+ A F
Sbjct: 365 NYFTSLGSCCWDLIKEGKLNVDRNCIPYAPNQRSHDECAAFF 406
>04_03_0999 -
21600231-21600788,21600896-21601056,21601149-21601241,
21601379-21601531,21601917-21601992,21602078-21602197,
21602348-21602597,21602917-21603008,21603408-21603581
Length = 558
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -1
Query: 423 ERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVF 316
+RP+ +RV T +R+P + +++ G LS F
Sbjct: 36 KRPRSSRVAQTRPQPEARIPGTQSDSEYMSGQLSAF 71
>01_05_0204 +
19246633-19246938,19247091-19247192,19247314-19247431,
19247977-19247996,19248122-19248160,19248282-19248342,
19248464-19248664,19248756-19249057,19249448-19249601,
19249683-19249939,19250015-19250045,19251027-19251166,
19252067-19252177,19253071-19253283
Length = 684
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/69 (24%), Positives = 34/69 (49%)
Frame = +2
Query: 188 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGXKKTDKHPPKNWGDVDTLG 367
D Q+ ++N D G + + SV+ E DP+ NG ++TD++ ++ +D
Sbjct: 342 DITQNDMQN-DCGTWDFGGCDDQESVYDEHCDPMDHSSMNGQEETDEYTFESAEGLDVNE 400
Query: 368 NLDPAGEFV 394
+D +F+
Sbjct: 401 RIDKIADFL 409
>11_04_0137 +
13909204-13909315,13910002-13910999,13911058-13911267,
13911522-13912056,13912154-13912461
Length = 720
Score = 27.9 bits (59), Expect = 5.1
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 459 SVRQGLKG-YPSSERP--QRTRV-ETTNSPAGSRLPSVSTSPQFLGGCLSVFXXPLW*SS 292
S R+G + + S +RP Q T E T AGS +P+ ST+P VF P +
Sbjct: 521 SSRRGYEAAHTSHDRPSFQLTPAPEYTRGSAGSGVPTSSTAPP----RPQVFQTPPYVQP 576
Query: 291 MIGSNSSANTEYDSASGA*IPTPESKFSTPDW 196
G++ SA+ Y +PT ++ +TP W
Sbjct: 577 TQGASGSAHFPY-------MPTGDNVLNTPAW 601
>09_04_0163 -
15249816-15249920,15250032-15250163,15250463-15250629,
15251259-15251448,15252530-15252661,15253275-15253382,
15253513-15253608,15253702-15253809,15253917-15254089,
15255026-15255401,15255887-15256030,15256125-15256799,
15256917-15256982,15257082-15257249
Length = 879
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 17 SARKAATMVDAATLEKLEAG-FSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDC 193
S K + + + +++ + G F K D S + K+ TRE D+ K + +LDC
Sbjct: 326 SVWKGGMIKEYSKIDECKTGDFGKRPLIDDISTVCKWFTREHSDTTYGKNAQLAAKVLDC 385
Query: 194 I 196
+
Sbjct: 386 V 386
>02_05_1309 + 35627549-35627679,35628377-35629361
Length = 371
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = -3
Query: 508 AGQGAGDLVLHLLXXXLGEAGVEGVPLERAAAAHAGGDHELAGGVEVAERVHVSP 344
AG+G G+ V L A G L R GGDH L G E E VSP
Sbjct: 67 AGEG-GEKVEVALRHGEVVADPGGGRLPRHGGCGGGGDHHLRRGGEAPELAEVSP 120
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 231 PTPESKFSTPDWMQS 187
P PE+K TPDW+QS
Sbjct: 117 PPPEAKKVTPDWLQS 131
>03_05_0908 + 28686855-28687328
Length = 157
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 34 NNGRRRNPREIGGWFQQAPG 93
++G R +PRE+ GWF A G
Sbjct: 26 SHGARPSPRELQGWFAAAAG 45
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 432 PSSERPQRTRVETTNSPAGSRLPSVSTSPQFLGG 331
PSS T +T +SP+ S PS S+SP G
Sbjct: 220 PSSTPTGSTPTQTPSSPSSSGTPSPSSSPSNSSG 253
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,958,016
Number of Sequences: 37544
Number of extensions: 295675
Number of successful extensions: 1255
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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