Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31708
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 149 2e-36
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 101 3e-22
SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 8e-22
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 3e-21
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 8e-21
SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 2e-19
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 5e-19
SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13) 52 4e-07
SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08) 52 4e-07
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 51 5e-07
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 48 6e-06
SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15) 36 0.026
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 29 3.0
SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9) 28 4.0
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6) 28 4.0
SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06) 28 4.0
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 28 5.3
SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11) 28 5.3
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 28 5.3
SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4) 28 5.3
SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_48544| Best HMM Match : TSP_1 (HMM E-Value=3.1e-32) 27 6.9
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 27 6.9
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4) 27 6.9
SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4) 27 6.9
SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027) 27 6.9
SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17) 27 6.9
SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10) 27 6.9
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 27 6.9
SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 27 9.2
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 149 bits (360), Expect = 2e-36
Identities = 79/169 (46%), Positives = 99/169 (58%)
Frame = +2
Query: 5 DGCSSARKAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTL 184
D + +K + AA K L+ + KSL+KKYLT E+F+ LK+KKT G TL
Sbjct: 171 DMYNGVKKLLEIEKAAVEAKRNVFPEVLKKPEVKSLMKKYLTEEMFNELKDKKTELGVTL 230
Query: 185 LDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGXKKTDKHPPKNWGDVDTL 364
DCI SGVENLDSG GIYA D ESY +FA LFD IIEDYH K KH +
Sbjct: 231 SDCINSGVENLDSGTGIYAGDEESYKLFAPLFDKIIEDYHAPYKLEQKHTSDMNPEKVEA 290
Query: 365 GNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSL 511
+LDP G F+ STR+R R+L+GY P L++ E+E+KV SL
Sbjct: 291 PDLDPEGSFIRSTRIRVARNLKGYALTPALSKKARLEIEEKVKNVFESL 339
Score = 148 bits (358), Expect = 3e-36
Identities = 78/158 (49%), Positives = 98/158 (62%), Gaps = 1/158 (0%)
Frame = +2
Query: 41 VDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 217
++ A +E+ F + L+ + KSLLKKYLT +VF+SLK KKTS G+ L DCI SGV NL
Sbjct: 614 IERAAIEEAHLKFPEDLKKPEVKSLLKKYLTEDVFNSLKEKKTSRGAGLYDCINSGVVNL 673
Query: 218 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVV 397
DSG G+YA D E Y VF ELFD IIEDYH K + H + NLD G F+
Sbjct: 674 DSGTGVYAADEECYEVFGELFDKIIEDYHAPYKLEENHKSDMDPEKVDAPNLDAEGAFIR 733
Query: 398 STRVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSL 511
STR+R R+L+GY P LT ++E KV G L+SL
Sbjct: 734 STRIRVARNLKGYALTPGLTRKERVDVESKVVGVLNSL 771
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 101 bits (243), Expect = 3e-22
Identities = 71/190 (37%), Positives = 98/190 (51%), Gaps = 28/190 (14%)
Frame = +2
Query: 26 KAATMVDAATLEKLEAGFSK-LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTL------ 184
K+ ++ A +EK + F + L + KSLLKKYLT E+F+SLK+KKT+ G +L
Sbjct: 337 KSLLEIERAAIEKQRSVFPEALNKEECKSLLKKYLTAEMFNSLKDKKTAKGISLYDCINS 396
Query: 185 ----------------LDCIQSGVENLDSGVG-----IYAPDAESYSVFAELFDPIIEDY 301
L+CI+ ++ V + D ESYS+F+ LFD I+E Y
Sbjct: 397 GVVNLDSSCGVYAGQRLECIRHIANSISVRVADVFYHLSTGDEESYSLFSPLFDKIVEHY 456
Query: 302 HNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTEXXXKEME 481
H K DKH + T NLDP G F+ STR+R R+L+GY P LT E+E
Sbjct: 457 HAPYKLADKHTSDMNPEKVTAPNLDPDGVFIRSTRIRVARNLKGYALTPGLTRKERNEIE 516
Query: 482 DKVSGTLSSL 511
KV+ L SL
Sbjct: 517 KKVTEVLCSL 526
Score = 85.0 bits (201), Expect = 3e-17
Identities = 61/150 (40%), Positives = 73/150 (48%), Gaps = 16/150 (10%)
Frame = +2
Query: 38 MVDAATLEKLEAGFS-----KLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQS 202
M DAA EK + + K + K LLKKYLT +VFD LK KKT G
Sbjct: 8 MADAAEAEKYRSKNAYPVPLKSAKCNPKCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGG 67
Query: 203 GVENLDSGVGIYAP---------DAESYSVFAELFDPIIEDYHNGXKKTDKHPPKNWGDV 355
G ++D G Y D ESY+VFA LFD +IEDYH+ K D H D
Sbjct: 68 GGGDVDDDDGEYIDADVAVVIVGDEESYTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDR 127
Query: 356 DTLGNLDPAGEFVVSTRVRCGRSLEG--YP 439
+LDP F+ STR+R GR L G YP
Sbjct: 128 VNAPDLDPDNRFIRSTRIRVGRDLAGKYYP 157
>SB_6621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 100 bits (239), Expect = 8e-22
Identities = 62/144 (43%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Frame = +2
Query: 104 KSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAP---------DAES 256
K LLKKYLT +VFD LK KKT G G ++D G Y D ES
Sbjct: 174 KCLLKKYLTNQVFDQLKTKKTKRGDGGCSDGGGGGGDVDDDDGEYIDADVAVVIVGDEES 233
Query: 257 YSVFAELFDPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGY 436
Y+VFA LFD +IEDYH+ K D H D +LDP F+ STR+R GR+L+GY
Sbjct: 234 YTVFAPLFDKVIEDYHSPYKLKDGHTSDMNPDRVNAPDLDPDNRFIRSTRIRVGRNLKGY 293
Query: 437 PFNPCLTEXXXKEMEDKVSGTLSS 508
P LT+ E+E K S T S
Sbjct: 294 GLAPSLTKKERVELEKKASFTAKS 317
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 98.3 bits (234), Expect = 3e-21
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Frame = +2
Query: 107 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAE 274
+L+ K+LT ++ L++K T G TL IQ+GV+N S VG+ A D ESY FAE
Sbjct: 61 NLMAKHLTPRLYVKLRDKSTPNGYTLDQAIQTGVDNPGHPFISTVGLVAGDEESYDTFAE 120
Query: 275 LFDPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCL 454
LFDP+IE+ H+G KK+DKH G D ++V+S+RVR GRS+ G+ P
Sbjct: 121 LFDPVIEERHSGFKKSDKHKTDLDSSKIRGGKFDE--KYVLSSRVRTGRSIRGFSLPPHC 178
Query: 455 TEXXXKEMEDKVSGTLSSL 511
T +E+E V+ L L
Sbjct: 179 TRAERREVERIVNDALDGL 197
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 97.1 bits (231), Expect = 8e-21
Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Frame = +2
Query: 113 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 280
+ K LT+E++ SL++K T G TL D IQ+GV+N VG A D ESY VFAEL
Sbjct: 2323 MAKVLTKEIYRSLRDKSTKNGFTLDDIIQTGVDNPGHPFIMTVGCVAGDEESYDVFAELL 2382
Query: 281 DPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 460
DP+IE H G KKTDKH D G LDP ++V+S+RVR GRS+ G+ P +
Sbjct: 2383 DPVIELRHGGYKKTDKHKTDLNPDNLKGGALDP--KYVLSSRVRTGRSIRGFCLPPHCSR 2440
Query: 461 XXXKEMEDKVSGTLSSLE 514
+ +E L+ L+
Sbjct: 2441 AERRSVEKISVDALAKLD 2458
>SB_34617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 92.3 bits (219), Expect = 2e-19
Identities = 56/137 (40%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Frame = +2
Query: 113 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 280
+ ++L+ ++ LK+K T G TL IQ+GV+N S VG+ A D ESY VFA+LF
Sbjct: 404 MARHLSPRLYTKLKDKVTPNGYTLDMAIQTGVDNPGHPFISTVGLVAGDEESYDVFADLF 463
Query: 281 DPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 460
DP+IE+ HNG KKTDKH G+ D +V+STR R GRS+ G+ P T
Sbjct: 464 DPVIEERHNGYKKTDKHVTDLNHRKLKGGSFDE--RYVLSTRCRTGRSIRGFSLPPHCTR 521
Query: 461 XXXKEMEDKVSGTLSSL 511
+ +E V L L
Sbjct: 522 AERRSVEKVVVDALDQL 538
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 91.1 bits (216), Expect = 5e-19
Identities = 63/175 (36%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
Frame = +2
Query: 5 DGCSSARKAATMVDAATLEKLEAGFSKLQGSD-SKSLLKKYLTREVFDSLKNKKTSFGST 181
+ S AR+ A +A +K + ++ G + ++ + K+LTR+V++ L N KT G T
Sbjct: 731 ESVSKAREEAIKKEAER-QKASSTLRRVPGPEQAQHYMAKFLTRDVYNKLCNLKTPSGFT 789
Query: 182 LLDCIQSGVENLDSG----VGIYAPDAESYSVFAELFDPIIEDYHNGXKKTDKHPPKNWG 349
L IQ+GV+N VG A D E+Y VFA L DP+IE HNG K KH
Sbjct: 790 LDGVIQTGVDNPGHPFIFTVGCVAGDEETYKVFAALLDPVIEARHNGYLKGAKHVTDLNP 849
Query: 350 DVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSLE 514
D + +G D FV+S RVR GRS+ G P T +E+E L++L+
Sbjct: 850 D-NLVGGDDLDANFVLSCRVRTGRSIRGLGLPPHCTRAERREVEKITVDALATLD 903
Score = 89.0 bits (211), Expect = 2e-18
Identities = 55/138 (39%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Frame = +2
Query: 113 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 280
+ K LT V++ L KT G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 370 MAKCLTPAVYNMLSVLKTPTGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 429
Query: 281 DPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 460
DP+IE HNG KKT KH + + +G D ++V+S RVR GRS+ G P +
Sbjct: 430 DPVIEKRHNGYKKTAKH-KTDLNPSNLIGGDDLDEKYVLSCRVRTGRSIRGLCLPPWCSR 488
Query: 461 XXXKEMEDKVSGTLSSLE 514
+E+E V+ L+ L+
Sbjct: 489 AERREVEKIVTSALAELD 506
Score = 88.6 bits (210), Expect = 3e-18
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Frame = +2
Query: 113 LKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVEN----LDSGVGIYAPDAESYSVFAELF 280
+ K +T++V+ L N +T G TL IQ+GV+N VG A D ESY VFA++F
Sbjct: 1 MAKCMTKDVYQRLSNLRTPSGYTLDMAIQTGVDNPGHPFIMTVGCVAGDEESYDVFADMF 60
Query: 281 DPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTE 460
DP+IE H+G +KTD H D +G D ++V+S RVR GRS+ G P T
Sbjct: 61 DPVIEKRHDGYRKTDMHKTDLNPD-HLIGGDDLDEKYVLSCRVRTGRSIRGLGLPPHCTR 119
Query: 461 XXXKEMEDKVSGTLSSLE 514
+E+E L SL+
Sbjct: 120 AERREVEKVSVEALDSLD 137
>SB_54283| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=1.4e-13)
Length = 490
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 86 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 265
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 63 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 121
Query: 266 FAELFDPIIEDY 301
F +LFDP+I ++
Sbjct: 122 FIKLFDPVISNF 133
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +2
Query: 353 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSLE 514
V G LD VVS RVR RSL+G+PF + +E+++ V L SL+
Sbjct: 279 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLK 329
>SB_20979| Best HMM Match : ATP-gua_PtransN (HMM E-Value=5.6e-08)
Length = 322
Score = 51.6 bits (118), Expect = 4e-07
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 86 LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 265
LQ + K++ ++L +++ K+ KT +G L D + V D+ +GI A D E Y
Sbjct: 54 LQQKNRKTVASQFLNEAIYEEYKDAKTVYGFRLFDILSYDVSYRDT-IGIRATDEECYYT 112
Query: 266 FAELFDPIIEDY 301
F +LFDP+I ++
Sbjct: 113 FIKLFDPVISNF 124
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +2
Query: 353 VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSLE 514
V G LD VVS RVR RSL+G+PF + +E+++ V L SL+
Sbjct: 270 VGVTGTLDA---HVVSCRVRVVRSLQGFPFAWVCSPNERREIQNVVKQALDSLK 320
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 51.2 bits (117), Expect = 5e-07
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 227 VGIYAPDAESYSVFAELFDPIIEDYHNGXK-KTDKHPPKNWGDVDTLGNLDPAGEFVVST 403
+G +A D ESY F + + P+I+ YH G T KH + + D A ++ST
Sbjct: 1 MGCHAGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKISTELSDSAKAKIIST 60
Query: 404 RVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSL 511
R+R R+L +P NP ++ E+ D ++ SL
Sbjct: 61 RIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSL 96
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 47.6 bits (108), Expect = 6e-06
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 188 DCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGXK-KTDKHPPKNWGDVDTL 364
D SG I D ESY F + + P+I+ YH G T KH + +
Sbjct: 80 DTKSSGPAKWTLARAINTGDKESYDDFKDFYYPVIQAYHKGFDINTSKHVTDMDPEKIST 139
Query: 365 GNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSL 511
D A ++STR+R R+L +P NP ++ E+ D ++ SL
Sbjct: 140 ELSDSAKAKIISTRIRVARNLSMFPLNPGGSKESRLEIIDLMAKVYDSL 188
>SB_47199| Best HMM Match : ATP-gua_PtransN (HMM E-Value=9.6e-15)
Length = 132
Score = 35.5 bits (78), Expect = 0.026
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Frame = +2
Query: 107 SLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLD----SGVGIYAPDAESY 259
+++ ++LT E++ L ++KTS G TL IQ GV+N S GI A D ES+
Sbjct: 77 NIMARHLTPEMYVHLCDRKTSNGFTLDQAIQPGVDNPTHPNISPCGIVAGDEESF 131
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 26 KAATMVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSG 205
KAA + + L KL AG++ L D+ L + LT E LK K S + +Q
Sbjct: 195 KAAVQLLKSVLPKLTAGYADLYHGDA---LVEVLTTEWHGDLKEKYPQDVSGIYQLVQGQ 251
Query: 206 VENLD 220
+E+ D
Sbjct: 252 LESRD 256
>SB_5521| Best HMM Match : SWIM (HMM E-Value=6.9)
Length = 150
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 308 GXKKTDKHPPKNWGDVDTLGNLDPAGEF 391
G K + PP + G+ DT G D GEF
Sbjct: 9 GGSKGFRPPPYSCGEFDTRGEFDTCGEF 36
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 441 KGYPSSERPQRTRVETTNS-PAGSRLPSVSTSP 346
+G SSERP+R+R T + P S LP +++P
Sbjct: 1178 RGSLSSERPERSRRRRTETEPRDSSLPCTASTP 1210
>SB_35966| Best HMM Match : CpaB (HMM E-Value=3.6)
Length = 277
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = -3
Query: 157 VLQAVEYFPGKVLLQQRLRVGSLELAETSLQFLEGCGVDH 38
+ +AV P +V+L R+++GS +LA+ L+ L+G G++H
Sbjct: 204 ITRAVIDGPLRVVL--RVQIGSCDLADEHLRKLDGGGLEH 241
>SB_35368| Best HMM Match : UIM (HMM E-Value=6.3e-06)
Length = 362
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 231 PTPESKFSTPDWMQSRRVDPNEVFLFFRLSNTS 133
P P+ KFS P + SR +D E L F L+ S
Sbjct: 5 PKPKEKFSEPVIIASRNLDSVEARLAFNLTTVS 37
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 68 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 196
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 30 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 73
>SB_33669| Best HMM Match : EMP70 (HMM E-Value=3.9e-11)
Length = 809
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 65 QDRAADKNHVYISYR-DCKKLDEEAFPEDLDEAPWSVL 101
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 68 EAGFSKLQGSDSKSL-LKKYLTREVFDSLKNKKTSFGSTLLDCI 196
+ G+ +G SK+L L+K V D LK +FG L +C+
Sbjct: 75 DVGYGVSEGMKSKALSLEKARKEAVTDGLKRALKNFGQALGNCV 118
>SB_41260| Best HMM Match : DUF1081 (HMM E-Value=1.4)
Length = 617
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 3 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 107
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 534 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 568
>SB_24839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 3 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLS 107
LT V+VP+ Q +T RN + S+S+ DP L+
Sbjct: 70 LTAVEVPKPGDQDTTLDKERNNSVTSSSTPDPPLT 104
>SB_48544| Best HMM Match : TSP_1 (HMM E-Value=3.1e-32)
Length = 326
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 308 GXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVR-CGRSLEGYPFNPC 451
G + +H P NWG+ + + + TR R C L Y PC
Sbjct: 188 GKCQLQEHCPGNWGEWSSWSSCSVTCDLGTKTRTRKCDNPLPKYGGKPC 236
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 36 QWSTPQPSRNWRL-VSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASNRVSR 212
+W P PS N V SS DP L R S+ P + ++ + S+ PS +S R +
Sbjct: 851 EWRPPSPSPNTEADVKESSDDPPL-RQRTSSFPVEINSTYPPRYASSNSPSAPSSPRTTA 909
Query: 213 TWTPAS 230
++ A+
Sbjct: 910 SYGTAT 915
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.5 bits (58), Expect = 6.9
Identities = 26/84 (30%), Positives = 33/84 (39%)
Frame = +3
Query: 3 LTVVQVPEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPP 182
L+ P P STP R S S T S + P ST T HS P
Sbjct: 9 LSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTP-STPCTHSTPS 67
Query: 183 SLTASNRVSRTWTPASVSTRRTPS 254
+ + + S TP++ ST TPS
Sbjct: 68 APSTPSTPSTPCTPSTPSTPSTPS 91
>SB_31879| Best HMM Match : Exo_endo_phos (HMM E-Value=1.4)
Length = 200
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_25245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 337 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 373
>SB_38561| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4)
Length = 432
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 145 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 181
>SB_35013| Best HMM Match : Exo_endo_phos (HMM E-Value=0.027)
Length = 381
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 189 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 225
>SB_26005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 101 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 137
>SB_22411| Best HMM Match : Kinesin (HMM E-Value=6.8e-17)
Length = 505
Score = 27.5 bits (58), Expect = 6.9
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +3
Query: 21 PEKPQQWSTPQPSRNWRLVSASSRDPTLSRC*RSTLPGKYSTA*RTKRPHSDPPSLTASN 200
P +P++ + PQPS+N S S P RS P S A R S P+
Sbjct: 278 PTQPRRSNLPQPSKNHASRSQSPAPPRGRSLKRSKSPAPGSAA--AARSRSPSPAR---- 331
Query: 201 RVSRTWTPASVSTRRT 248
S T TP ++S+ +T
Sbjct: 332 --SSTSTPPTISSVKT 345
>SB_12999| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8e-10)
Length = 734
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 605 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 641
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 192 QSRRVDPNEVFLFFRLSNTSLVRYFFSSDLESDPWSLL 79
Q R D N V++ +R L F DL+ PWS+L
Sbjct: 119 QDRAADKNHVYISYR-DCKKLDEEAFLKDLDEAPWSVL 155
>SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1007
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -1
Query: 438 GYPSSERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVFXXPLW 301
G R QR R +T P+ + S+ + LGG + + P W
Sbjct: 513 GLEEIHRQQRARYTSTTRPSSASSKSLLLTTLLLGGDIQINPGPNW 558
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = +3
Query: 162 RPHSDPPSLTASNRVSRTWTPASVST--RRTP 251
RPH+DP TWTP +T RTP
Sbjct: 175 RPHTDPTQTPHGPHTDPTWTPHRPNTDPTRTP 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,637,605
Number of Sequences: 59808
Number of extensions: 274756
Number of successful extensions: 1004
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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