Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31708
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   281   2e-78
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   258   3e-71
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   2.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   4.3  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   10.0 

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  281 bits (690), Expect = 2e-78
 Identities = 129/159 (81%), Positives = 143/159 (89%)
 Frame = +2

Query: 38  MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENL 217
           MVD A L+KLE GFSKL  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENL
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENL 60

Query: 218 DSGVGIYAPDAESYSVFAELFDPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVV 397
           DSGVGIYAPDAE+Y++FA+LFDPIIEDYH G KKTDKHPPK++GDVD+LGNLDPA EF+V
Sbjct: 61  DSGVGIYAPDAEAYTLFADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIV 120

Query: 398 STRVRCGRSLEGYPFNPCLTEXXXKEMEDKVSGTLSSLE 514
           STRVRCGRSLEGYPFNPCLTE   KEME+KVS TLS LE
Sbjct: 121 STRVRCGRSLEGYPFNPCLTEAQYKEMEEKVSSTLSGLE 159


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  258 bits (631), Expect = 3e-71
 Identities = 117/143 (81%), Positives = 130/143 (90%)
 Frame = +2

Query: 86  LQGSDSKSLLKKYLTREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSV 265
           L  SDSKSLLKKYL+++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTL 60

Query: 266 FAELFDPIIEDYHNGXKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFN 445
           FA+LFDPIIEDYH G KKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFN
Sbjct: 61  FADLFDPIIEDYHGGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFN 120

Query: 446 PCLTEXXXKEMEDKVSGTLSSLE 514
           PCLTE   KEME+KVS TLS LE
Sbjct: 121 PCLTEAQYKEMEEKVSSTLSGLE 143


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 133 GSIRQPEEQKDLIRIHPP 186
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 15 QVPEKPQQWSTPQPSR 62
          Q P+ PQ+ S P PS+
Sbjct: 29 QSPQAPQRGSPPNPSQ 44



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 402 VETTNSPAGSRLPSVSTSP 346
           V    SPAG +LP  + +P
Sbjct: 398 VSAVRSPAGGQLPPSAGAP 416


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 162 FLFFRLSNTSLVRYFFSSDLESD 94
           F+F  L   +LV Y   SD+ SD
Sbjct: 314 FVFGALLEFALVNYASRSDMHSD 336


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 162 FLFFRLSNTSLVRYFFSSDLESD 94
           F+F  L   +LV Y   SD+ SD
Sbjct: 314 FVFGALLEFALVNYASRSDMHSD 336


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 298 LPQWXXEDRQAP 333
           LPQW    R+AP
Sbjct: 484 LPQWCLPPREAP 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,518
Number of Sequences: 438
Number of extensions: 2601
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)