Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31705
(394 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36362| Best HMM Match : Asp (HMM E-Value=0) 99 1e-21
SB_9198| Best HMM Match : Asp (HMM E-Value=2.2e-09) 37 0.007
SB_1947| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.33
SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11) 29 1.8
SB_27646| Best HMM Match : CbiK (HMM E-Value=2.2) 27 4.1
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_14425| Best HMM Match : LRR_1 (HMM E-Value=3.3e-12) 27 7.2
SB_38034| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_37733| Best HMM Match : 7tm_1 (HMM E-Value=0.21) 26 9.5
SB_9692| Best HMM Match : DUF1054 (HMM E-Value=3.5) 26 9.5
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
SB_70| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.5
>SB_36362| Best HMM Match : Asp (HMM E-Value=0)
Length = 326
Score = 98.7 bits (235), Expect = 1e-21
Identities = 49/78 (62%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Frame = +1
Query: 166 MKTARTHFHEVGTELELLRLKYDVT---GPSPEPLSNYLDAQYYGVISIGTPPQSFKVVF 336
M T R EVG +E L KY G PEPL NY+DAQYYG I+IGTPPQ F VVF
Sbjct: 1 MPTPRQSLKEVGISVEQLLGKYGGKYEGGDVPEPLINYMDAQYYGEITIGTPPQKFTVVF 60
Query: 337 DTGSCNLWVPSKKCHYTN 390
DTGS NLWVPSKKC +TN
Sbjct: 61 DTGSSNLWVPSKKCSWTN 78
>SB_9198| Best HMM Match : Asp (HMM E-Value=2.2e-09)
Length = 278
Score = 36.7 bits (81), Expect = 0.007
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +1
Query: 193 EVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKVVFDTGSCNLWVPSK 372
+ G ++ LLR K D + E L YY ++G+PPQ V+ DTGS N V +
Sbjct: 11 KTGIKIPLLRTKRD-NNVAMENLKGRPGQGYYIASNLGSPPQRINVLVDTGSSNFAVAAS 69
Query: 373 KCHY 384
Y
Sbjct: 70 AHPY 73
>SB_1947| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 31.1 bits (67), Expect = 0.33
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 154 PLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNY 270
PL ++ R H ++ T LEL+ K + PS +PL++Y
Sbjct: 112 PLTWNESFRLHIKQIYTNLELITTKQHSSSPSRKPLNSY 150
>SB_47634| Best HMM Match : Metallophos (HMM E-Value=1e-11)
Length = 585
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 142 LYRVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEP 258
++ V L +K + ++++ GT+L + +LK T P P P
Sbjct: 244 IHDVLLTDLKPSSLYYYQYGTDLGMSKLKNFTTAPLPNP 282
>SB_27646| Best HMM Match : CbiK (HMM E-Value=2.2)
Length = 423
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -3
Query: 230 YFNL---NSSSSVPTS*KWVLAVFIRCNGTLYSAITELAISAKKNKDIFP 90
YFN+ N ++++P + + L F+ T+Y I ++A + K K FP
Sbjct: 89 YFNIKVANGTNNIPWTSPFELETFM--GSTVYKTIAKIAKTVSKGKKYFP 136
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 263 DNGSG-EGPVTSYFNLNSSSSVPTS*KWVLAVFIRCNGTLYSAI 135
D GSG EG V S SSS+ T K +A F NGT + A+
Sbjct: 156 DEGSGTEGDVESEGVSESSSARSTPVKDTMAEFGHSNGTTFVAL 199
>SB_14425| Best HMM Match : LRR_1 (HMM E-Value=3.3e-12)
Length = 1356
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 151 VPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSFKV 330
V +H+ + HE +L++ K + L++ +DA++ V+ +G P K
Sbjct: 500 VTIHKNRATMDFPHERSEQLKVYPPKLGKDTRELKQLADIIDAEHKNVLVVGRPGIG-KT 558
Query: 331 VFDTGSCNLWVPSK 372
+ T LW S+
Sbjct: 559 MMCTRLLRLWAESE 572
>SB_38034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +1
Query: 148 RVPLHRMKTARTHFHEVGTELELLRLKYDVTGPSPEPLSNYLDAQYYGVISIGTPPQSFK 327
+V +H+ + HE +L++ K + +++ +DA++ V+ +G P K
Sbjct: 171 KVTIHKNRATMDFPHERSEQLKVYPPKRGKDTRELKQIADIIDAEHKNVLVVGRPGIG-K 229
Query: 328 VVFDTGSCNLWVPSK 372
+ T LW S+
Sbjct: 230 TMMCTRLLRLWAESE 244
>SB_37733| Best HMM Match : 7tm_1 (HMM E-Value=0.21)
Length = 146
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 70 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTAR 180
R++ +T G SLF L L++ + + PLH T R
Sbjct: 53 RIVDSTSGYASLFSLVLVSLERVRVIVWPLHNRMTTR 89
>SB_9692| Best HMM Match : DUF1054 (HMM E-Value=3.5)
Length = 287
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 76 LKTTMGKISLFFLALIASSVMALYR-VPLHRMKTARTHFHEVGTELELLRLKYDVTGPSP 252
L TT+ ++ LFF + I + A + + + + + T V LL+ YD G +P
Sbjct: 4 LNTTLSRVKLFFKSFIPDDLDAFIKDILIPKFRATLTLIAGVEFPRSLLQPVYDENGVNP 63
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 63 LVAASKNNNGKDIFIFFGA 119
L+A SK NG IF+F GA
Sbjct: 48 LIAYSKKGNGNMIFLFIGA 66
>SB_70| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 70 RLLKTTMGKISLFFLALIASSVMALYRVPLHRMKTAR 180
R++ +T G SLF L L++ + + PLH T R
Sbjct: 102 RIVDSTSGYASLFSLVLVSLERVRVIVWPLHNRMTTR 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,732,645
Number of Sequences: 59808
Number of extensions: 253035
Number of successful extensions: 549
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 678472135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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