Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31704
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         260   1e-71
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         260   1e-71
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         260   1e-71
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          254   1e-69
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   2.8  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   2.8  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   3.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   3.8  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   6.6  
DQ080821-1|AAY89467.1|  170|Anopheles gambiae transcription fact...    22   8.7  
DQ080820-1|AAY89466.1|  170|Anopheles gambiae transcription fact...    22   8.7  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  260 bits (638), Expect = 1e-71
 Identities = 117/133 (87%), Positives = 121/133 (90%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
           MCD++VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
            KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TQIMFETLNSPAM 444
           TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  260 bits (638), Expect = 1e-71
 Identities = 117/133 (87%), Positives = 121/133 (90%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
           MCD++VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
            KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TQIMFETLNSPAM 444
           TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  260 bits (638), Expect = 1e-71
 Identities = 117/133 (87%), Positives = 121/133 (90%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
           MCD++VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA 
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
            KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TQIMFETLNSPAM 444
           TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  254 bits (622), Expect = 1e-69
 Identities = 114/133 (85%), Positives = 119/133 (89%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
           MCDDD  ALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG+KD+YVGDEA 
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
            KRGILTLKYPIEHG ITNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPK+NREKM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120

Query: 406 TQIMFETLNSPAM 444
           TQIMFET  +PA+
Sbjct: 121 TQIMFETFAAPAV 133


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 242 RIPLLXWASSPT*ESLWPIPTIT 174
           R P     S+PT  S W  PTIT
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTIT 152


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 242 RIPLLXWASSPT*ESLWPIPTIT 174
           R P     S+PT  S W  PTIT
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTIT 152


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 17 PQHKHTQSSRCATTMLLRL*STMAPAC 97
          P H H+  S  +TT +    ++  PAC
Sbjct: 16 PHHHHSSQSPTSTTTVTMATASPVPAC 42


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 17 PQHKHTQSSRCATTMLLRL*STMAPAC 97
          P H H+  S  +TT +    ++  PAC
Sbjct: 16 PHHHHSSQSPTSTTTVTMATASPVPAC 42


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 242 RIPLLXWASSPT*ESLWPIPTIT 174
           + P     S+PT  S W  PTIT
Sbjct: 131 KFPTTTTTSAPTTPSQWTDPTIT 153


>DQ080821-1|AAY89467.1|  170|Anopheles gambiae transcription factor
           3C protein.
          Length = 170

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +1

Query: 163 RHXGVMVGMGHKDSYVGDEAXXKRGILTLKYPIEHGXITNWDDMEKIWHHTF 318
           RH  ++     KDSY   EA         KYP+        DD++  W   F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162


>DQ080820-1|AAY89466.1|  170|Anopheles gambiae transcription factor
           3C protein.
          Length = 170

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +1

Query: 163 RHXGVMVGMGHKDSYVGDEAXXKRGILTLKYPIEHGXITNWDDMEKIWHHTF 318
           RH  ++     KDSY   EA         KYP+        DD++  W   F
Sbjct: 119 RHACLLNTTSSKDSYHEIEAR--------KYPVLRYRFETMDDLQNYWDRLF 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 407,534
Number of Sequences: 2352
Number of extensions: 6843
Number of successful extensions: 63
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)