Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31704
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 264 3e-71
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 262 8e-71
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 262 8e-71
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 262 8e-71
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 262 8e-71
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 262 8e-71
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 262 8e-71
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 262 8e-71
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 251 2e-67
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 223 5e-59
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 180 4e-46
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 168 1e-42
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 167 4e-42
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 167 4e-42
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 163 7e-41
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 141 2e-34
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 116 8e-27
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 97 5e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 67 6e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 48 4e-06
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 1.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 264 bits (646), Expect = 3e-71
Identities = 119/133 (89%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDDDVAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 262 bits (642), Expect = 8e-71
Identities = 118/133 (88%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 262 bits (642), Expect = 8e-71
Identities = 118/133 (88%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 262 bits (642), Expect = 8e-71
Identities = 118/133 (88%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 262 bits (642), Expect = 8e-71
Identities = 118/133 (88%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 262 bits (642), Expect = 8e-71
Identities = 117/133 (87%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDDDVAAL++DNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 262 bits (642), Expect = 8e-71
Identities = 118/133 (88%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 262 bits (642), Expect = 8e-71
Identities = 118/133 (88%), Positives = 121/133 (90%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKM 405
KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 406 TQIMFETLNSPAM 444
TQIMFET N+PAM
Sbjct: 121 TQIMFETFNTPAM 133
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 251 bits (615), Expect = 2e-67
Identities = 111/131 (84%), Positives = 119/131 (90%)
Frame = +1
Query: 52 DDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXK 231
++++AALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 232 RGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQ 411
RGILTLKYPIEHG +TNWDDMEKIWHHTFYNELR+AP EHPVLLTE PLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 412 IMFETLNSPAM 444
IMFET N+PAM
Sbjct: 122 IMFETFNTPAM 132
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 223 bits (545), Expect = 5e-59
Identities = 100/115 (86%), Positives = 103/115 (89%)
Frame = +1
Query: 100 KXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKRGILTLKYPIEHGXIT 279
+ GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA KRGILTLKYPIEHG +T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 280 NWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQIMFETLNSPAM 444
NWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKMTQIMFET N+PAM
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 119
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 180 bits (438), Expect = 4e-46
Identities = 80/89 (89%), Positives = 82/89 (92%)
Frame = +1
Query: 178 MVGMGHKDSYVGDEAXXKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPV 357
MVGMG KDSYVGDEA KRGILTLKYPIEHG +TNWDDMEKIWHHTFYNELRVAP EHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 358 LLTEXPLNPKANREKMTQIMFETLNSPAM 444
LLTE PLNPKANREKMTQIMFET N+PAM
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAM 89
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 168 bits (409), Expect = 1e-42
Identities = 76/86 (88%), Positives = 77/86 (89%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDDDVAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKI 303
KRGILTLKYPIEHG +TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 167 bits (405), Expect = 4e-42
Identities = 75/86 (87%), Positives = 77/86 (89%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKI 303
KRGILTLKYPIEHG +TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 167 bits (405), Expect = 4e-42
Identities = 75/86 (87%), Positives = 77/86 (89%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDD+VAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDMEKI 303
KRGILTLKYPIEHG +TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 163 bits (395), Expect = 7e-41
Identities = 73/83 (87%), Positives = 74/83 (89%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAX 225
MCDDDVAALVVDNGSGMCK GFAGDD PRAV PSI GRPRH GVMVGMG KDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 XKRGILTLKYPIEHGXITNWDDM 294
KRGILTLKYPIEHG +TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 141 bits (342), Expect = 2e-34
Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 4/135 (2%)
Frame = +1
Query: 52 DDDVAA---LVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEA 222
D DV A +V+DNGSG+ K GFAG+ P+ + GRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 223 XXKRGILTLKYPIEHGXITNWDDMEKIWHHTF-YNELRVAPXEHPVLLTEXPLNPKANRE 399
RG+ +++YP+EHG + NW DMEKIW + F ++L++ P EHPVLLT+ PLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 400 KMTQIMFETLNSPAM 444
+ +I FET N PA+
Sbjct: 122 RSAEIFFETFNVPAL 136
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 116 bits (279), Expect = 8e-27
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 3/121 (2%)
Frame = +1
Query: 70 LVVDNGSGMCKXGFAGDDXPRAVXPSIXGRP--RHXGVMVGMGHKDSYVGDEAXXKRGIL 243
+VVDNG+G K G+AG + P + PS+ GRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 244 TLKYPIEHGXITNWDDMEKIWHHTFYNE-LRVAPXEHPVLLTEXPLNPKANREKMTQIMF 420
+ YP+++G + NWDDM +W HTF E L + P E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 421 E 423
E
Sbjct: 129 E 129
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 97.1 bits (231), Expect = 5e-21
Identities = 54/146 (36%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Frame = +1
Query: 46 MCDDDVAALVVDNGSGMCKXGFAGDDXPRAVXPS-IXGRPR-----------HXGVMVGM 189
M + A V+DNG+G K G+AG+ P+ + PS I + + + V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 190 GHKDSYVGDEAXXKRGI-LTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLT 366
D ++GDEA T+KYPI HG + +WD ME+ W + LR P +H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 367 EXPLNPKANREKMTQIMFETLNSPAM 444
E PLN NRE +IMFE+ N P +
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGL 146
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 66.9 bits (156), Expect = 6e-12
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRP---------RHXGVMVGMG----- 192
D+V+ LV D GS + GFAG++ P+ PS + + G
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 193 --HKDSYVGD-EAXXKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLL 363
K+ ++G + R ++ ++ G I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 364 TEXPLNPKANREKMTQIMFETLNSPA 441
+E N +A REK+T+IMFE PA
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPA 154
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.6 bits (108), Expect = 4e-06
Identities = 32/121 (26%), Positives = 55/121 (45%)
Frame = +1
Query: 61 VAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKRGI 240
+ ++ DNG K G + PR V SI + +H V + H+ +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 241 LTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQIMF 420
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 421 E 423
+
Sbjct: 116 D 116
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.6 bits (108), Expect = 4e-06
Identities = 32/121 (26%), Positives = 55/121 (45%)
Frame = +1
Query: 61 VAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKRGI 240
+ ++ DNG K G + PR V SI + +H V + H+ +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 241 LTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQIMF 420
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 421 E 423
+
Sbjct: 116 D 116
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 191 PIPTITPWWRGRPXMDGKTARGXSSPAKPXLHMPEPL 81
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,641,056
Number of Sequences: 27780
Number of extensions: 146227
Number of successful extensions: 433
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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