Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31704
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   0.67 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.67 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   2.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   4.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.2  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 426 GLKHDLGHLLPVGLGVEGGFG 364
           GLK+  G  + VG+G+ GG G
Sbjct: 819 GLKNMAGVFIVVGVGIIGGIG 839


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 0.67
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 328  LRVAPXEHPVLLTEXPLNPKANREKM 405
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 336 DTQLIVEGVVPDLLHVI 286
           + Q +V+ V PD+LH+I
Sbjct: 21  NNQTVVDKVPPDMLHLI 37


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 438 GGVQGLKHDLGHLLPVGL 385
           G ++G+K  L H L +G+
Sbjct: 49  GDIEGIKEKLDHFLEMGV 66


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 438 GGVQGLKHDLGHLLPVGL 385
           G ++G+K  L H L +G+
Sbjct: 49  GDIEGIKEKLDHFLEMGV 66


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 91  GMCKXGFAGD 120
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 253 YPIEHGXITNWDDMEKIWHHTFYNE 327
           YP+E G +TN   M +     F  E
Sbjct: 34  YPLERGELTNSGKMREYQLGQFLRE 58


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 253 YPIEHGXITNWDDMEKIWHHTFYNE 327
           YP+E G +TN   M +     F  E
Sbjct: 49  YPLERGELTNSGKMREYQLGQFLRE 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,313
Number of Sequences: 438
Number of extensions: 1536
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)