Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31704
(449 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 239 5e-64
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 239 6e-64
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 239 6e-64
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 239 8e-64
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 239 8e-64
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 238 1e-63
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 238 1e-63
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 238 1e-63
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 238 1e-63
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 219 7e-58
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 173 6e-44
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 149 6e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 126 7e-30
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 96 8e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 8e-20
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 92 2e-19
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 62 1e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 59 2e-09
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 54 4e-08
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 31 0.36
At5g25280.2 68418.m02999 serine-rich protein-related contains so... 27 4.4
At5g25280.1 68418.m02998 serine-rich protein-related contains so... 27 4.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 27 5.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 27 5.9
At1g04660.1 68414.m00463 glycine-rich protein 27 7.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 239 bits (586), Expect = 5e-64
Identities = 107/130 (82%), Positives = 114/130 (87%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
+D+ LV DNG+GM K GFAGDD PRAV PSI GRPRH GVMVGMG KD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG ++NWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET N+PAM
Sbjct: 125 MFETFNTPAM 134
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 239 bits (585), Expect = 6e-64
Identities = 107/130 (82%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
+D+ LV DNG+GM K GFAGDD PRAV PSI GRPRH GVMVGMG KD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG + NWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET N+PAM
Sbjct: 125 MFETFNTPAM 134
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 239 bits (585), Expect = 6e-64
Identities = 107/130 (82%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
+D+ LV DNG+GM K GFAGDD PRAV PSI GRPRH GVMVGMG KD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG + NWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET N+PAM
Sbjct: 125 MFETFNTPAM 134
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 239 bits (584), Expect = 8e-64
Identities = 106/130 (81%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
+D+ LV DNG+GM K GFAGDD PRAV PSI GRPRH GVMVGMG KD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG + NWDDMEKIWHHTFYNELRVAP EHP+LLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET N+PAM
Sbjct: 125 MFETFNAPAM 134
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 239 bits (584), Expect = 8e-64
Identities = 106/130 (81%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
+D+ LV DNG+GM K GFAGDD PRAV PSI GRPRH GVMVGMG KD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG + NWDDMEKIWHHTFYNELRVAP EHP+LLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET N+PAM
Sbjct: 125 MFETFNAPAM 134
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 238 bits (583), Expect = 1e-63
Identities = 107/130 (82%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
+D+ LV DNG+GM K GFAGDD PRAV PSI GRPRH GVMVGMG KD+YVGDEA KR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG ++NWDDMEKIWHHTFYNELRVAP EHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET N PAM
Sbjct: 125 MFETFNVPAM 134
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 238 bits (583), Expect = 1e-63
Identities = 105/130 (80%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
DD+ +V DNG+GM K GFAGDD PRAV PS+ GRPRH GVMVGM KD+YVGDEA KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG ++NWDDMEKIWHHTFYNELR+AP EHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET NSPAM
Sbjct: 125 MFETFNSPAM 134
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 238 bits (583), Expect = 1e-63
Identities = 105/130 (80%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
DD+ +V DNG+GM K GFAGDD PRAV PS+ GRPRH GVMVGM KD+YVGDEA KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG ++NWDDMEKIWHHTFYNELR+AP EHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET NSPAM
Sbjct: 125 MFETFNSPAM 134
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 238 bits (583), Expect = 1e-63
Identities = 105/130 (80%), Positives = 113/130 (86%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
DD+ +V DNG+GM K GFAGDD PRAV PS+ GRPRH GVMVGM KD+YVGDEA KR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GILTLKYPIEHG ++NWDDMEKIWHHTFYNELR+AP EHPVLLTE PLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 415 MFETLNSPAM 444
MFET NSPAM
Sbjct: 125 MFETFNSPAM 134
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 219 bits (535), Expect = 7e-58
Identities = 95/130 (73%), Positives = 109/130 (83%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKR 234
D+ A+V DNG+GM K GFAGDD PRAV PS+ GRPRH GVMVGM KD++VGDEA +R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 235 GILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQI 414
GIL+LKYPIEHG ++NWDDMEKIWHHTFYNELR+ P EHP+LLTE PLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 415 MFETLNSPAM 444
MFE+ P+M
Sbjct: 126 MFESFAFPSM 135
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 173 bits (420), Expect = 6e-44
Identities = 79/125 (63%), Positives = 92/125 (73%)
Frame = +1
Query: 70 LVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKRGILTL 249
+V D G GM + GFAGD+ P+ V P + GRPR G+ +SYVG+E R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 250 KYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQIMFETL 429
K P+EHG + NWDDMEKIWH+TFYNELRV P EHPVLLTE P NPKANREKMTQIMFE+
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 430 NSPAM 444
+ PAM
Sbjct: 119 DVPAM 123
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 149 bits (362), Expect = 6e-37
Identities = 65/89 (73%), Positives = 75/89 (84%)
Frame = +1
Query: 178 MVGMGHKDSYVGDEAXXKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPV 357
MVGM D +VGD+A + GILTL YP+EHG ++NWDDMEKIW+HTFY+ELRVAP EHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 358 LLTEXPLNPKANREKMTQIMFETLNSPAM 444
LLTE PLNPKA+REKMTQIMFET P+M
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSM 89
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 126 bits (304), Expect = 7e-30
Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRP--RHXGVMVGMGHKDSYVGDEAXX 228
D+ +V DNG+G K GFAG++ P +V P + GRP R+ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 229 KRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMT 408
R L + YP+ +G + NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 409 QIMFETLN 432
+ MFE N
Sbjct: 122 ETMFEKYN 129
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 96.3 bits (229), Expect = 8e-21
Identities = 56/152 (36%), Positives = 81/152 (53%), Gaps = 22/152 (14%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVM--------VGMGHKDS-- 204
D+V+A+VVD GS CK G+AG+D P+AV PS+ G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 205 -----------YVGDEAXX-KRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXE 348
YVG +A +R + + PI+ G +++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 349 HPVLLTEXPLNPKANREKMTQIMFETLNSPAM 444
HP+LL E PLN + REK ++MFE PA+
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPAL 156
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.1 bits (221), Expect = 8e-20
Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 21/147 (14%)
Frame = +1
Query: 67 ALVVDNGSGMCKXGFAGDDXPRAVXPSIXG-----------------RPRHX-GVMVGMG 192
A+V+DNG+G K GFAG+ P + P++ + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 193 HKDSYVGDEAXXK-RGILT--LKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLL 363
D Y+GDEA K R T L YPIEHG + +WD ME+ W +N LR P +H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 364 TEXPLNPKANREKMTQIMFETLNSPAM 444
TE PL P +RE +I+FET N P +
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGL 151
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 91.9 bits (218), Expect = 2e-19
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Frame = +1
Query: 55 DDVAALVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVG---------------M 189
D+V+A+VVD GS CK G+AG+D P+AV PS+ G G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 190 GHKDSYVGDEAXX-KRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLT 366
G + Y G +A +R + + P + G +T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 367 EXPLNPKANREK 402
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 62.5 bits (145), Expect = 1e-10
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Frame = +1
Query: 70 LVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGD--EAXXKRGIL 243
+V+DNG+ + G+AG+ PR V +I RPRH G + VGD + K
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 244 TL---KYPIEHGXITNWDDMEKIWHHTFYN-ELRVAPXEHPVLLTEXPLNPKANREKMTQ 411
T + P + + ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 412 IMFETLNSPAM 444
++FET PA+
Sbjct: 138 LLFETYGVPAV 148
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 58.8 bits (136), Expect = 2e-09
Identities = 34/118 (28%), Positives = 57/118 (48%)
Frame = +1
Query: 70 LVVDNGSGMCKXGFAGDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKRGILTL 249
+V+DNG G+ K G G+ P V P+ +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 250 KYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKANREKMTQIMFE 423
+ PI+ G + N D +IW H F + L +AP +LLTE PL+ + + +++FE
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFE 119
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 54.0 bits (124), Expect = 4e-08
Identities = 46/124 (37%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 67 ALVVDNGSGMCKXGFA-GDDXPRAVXPSIXGRPRHXGVMVGMGHKDSYVGDEAXXKRGIL 243
ALVVD GS K G A D P + PS R MV G + D +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 244 TLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPX-EHPVLLTEXPLNPKANREKMTQIMF 420
TL PIE G I +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 421 ETLN 432
ET N
Sbjct: 113 ETFN 116
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 31.1 bits (67), Expect = 0.36
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 429 QGLKHDL-GHLL--PVGLGVEGGFGEQHGVLXGGDTQLIVEGVVPDLL 295
+ L+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 757 ESLEHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At5g25280.2 68418.m02999 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 3 VNTSVPNTNTHKVQDVRRRCCCA 71
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At5g25280.1 68418.m02998 serine-rich protein-related contains some
similarity to serine-rich proteins
Length = 220
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 3 VNTSVPNTNTHKVQDVRRRCCCA 71
V+++ P+ N HK+ D RRRC C+
Sbjct: 108 VSSNKPS-NHHKIPDSRRRCMCS 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +1
Query: 214 DEAXXKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKAN 393
D A L++KY + H + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 394 REK 402
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.1 bits (57), Expect = 5.9
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +1
Query: 214 DEAXXKRGILTLKYPIEHGXITNWDDMEKIWHHTFYNELRVAPXEHPVLLTEXPLNPKAN 393
D A L++KY + H + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 394 REK 402
REK
Sbjct: 225 REK 227
>At1g04660.1 68414.m00463 glycine-rich protein
Length = 212
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -3
Query: 441 GGGVQGLKHDLGHLLPVGLGVEGGFGEQHGVLXG 340
GGG+ G+ LG G+GV GG G HGV+ G
Sbjct: 176 GGGLGGVG-GLGKA--GGIGVGGGIGGGHGVVGG 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,394,364
Number of Sequences: 28952
Number of extensions: 143194
Number of successful extensions: 390
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 385
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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