Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31703
         (400 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.5  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   2.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   5.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   5.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -1

Query: 241 AVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAES 98
           A P PP E A    P  + + S P S   E    C  L   + +S ES
Sbjct: 43  ASPAPPEEEAASPTPGDVPTPSSPRSIS-EDPLNCRDLPNSRCNSRES 89


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 169 MV*TKIKSKRALKALPLHWAVSALPLVVPSPQ 264
           +V T++ +      LP   A S LPL+VP PQ
Sbjct: 174 LVPTRLANGDIALVLPTQGA-SPLPLLVPIPQ 204


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 66  PNPGVMVSKSRNPW 25
           PN  ++V+ S  PW
Sbjct: 61  PNENLVVTSSNRPW 74


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 66  PNPGVMVSKSRNPW 25
           PN  ++V+ S  PW
Sbjct: 62  PNENLVVTSSNRPW 75


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 66  PNPGVMVSKSRNPW 25
           PN  ++V+ S  PW
Sbjct: 62  PNENLVVTSSNRPW 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,833
Number of Sequences: 336
Number of extensions: 1800
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)