Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31703
(400 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 31 0.25
01_06_0191 - 27334412-27335155 31 0.25
11_02_0082 - 8088169-8088284,8088613-8088697,8090344-8090442,809... 31 0.44
01_05_0750 - 24895954-24896175,24896774-24897304,24897420-24897869 31 0.44
02_01_0622 - 4658133-4658150,4658269-4658337,4658436-4658462,465... 30 0.77
03_02_0350 - 7734494-7734952,7735765-7736133 29 1.4
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 28 3.1
01_06_0259 + 27955005-27955436,27955685-27955822 28 3.1
10_07_0110 + 12977702-12977958,12978374-12978527,12978661-129787... 27 4.1
07_03_1367 + 26072270-26072374,26074047-26074724 27 4.1
07_03_1155 - 24413270-24413728 27 4.1
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 27 4.1
01_01_0315 + 2560337-2560675,2560737-2560781,2561630-2561749,256... 27 5.5
07_01_0469 - 3552409-3553368 27 7.2
04_04_1108 + 30961600-30962013,30963131-30964465 27 7.2
02_04_0221 - 21021886-21022144,21022227-21022345,21022681-210229... 27 7.2
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 26 9.5
07_03_1071 + 23753883-23754752 26 9.5
05_01_0380 + 2978256-2979284 26 9.5
04_04_0634 - 26777889-26778452,26778526-26778797,26778905-267791... 26 9.5
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 26 9.5
02_04_0066 + 19408431-19408865,19410540-19410620 26 9.5
01_06_0281 + 28155039-28155160,28155243-28155333,28155822-281558... 26 9.5
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = -1
Query: 250 PPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAES----PKLPN 83
PP P P ++A PS +L +P A + + PAL LP ++ + S P L
Sbjct: 221 PPPTPPRPLPDMAGPSSATPLLPLQLPGLAGSSSAMSLPALQLPGMAGSSSAMPLPPLSL 280
Query: 82 PGV 74
PG+
Sbjct: 281 PGL 283
>01_06_0191 - 27334412-27335155
Length = 247
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1
Query: 346 VYXTREL*AVKQIVLTCXDQCLRPFAIFEVRAPPMAVPIPPNEVAMPSRPFSILSSSIPW 167
V T L AVK + + D+ L PF +F V+AP A P A P + S ++S P
Sbjct: 160 VTVTNALSAVKPLAVYSVDKVLLPFELFGVKAPAAA---PTASTAKPKKGGSTEAASGPA 216
Query: 166 SAK 158
A+
Sbjct: 217 GAE 219
>11_02_0082 -
8088169-8088284,8088613-8088697,8090344-8090442,
8090537-8090609,8090694-8090804,8090901-8091074,
8091184-8091574,8091662-8092283,8092379-8093251,
8093294-8093800
Length = 1016
Score = 30.7 bits (66), Expect = 0.44
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = -1
Query: 256 RAPPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPG 77
RAP P P + PS P L+ S+P A PAL+ P+ + P+ P P
Sbjct: 537 RAPSPPAPPSPPQDPAPSPPHDPLAPSLP-QAPAATPPQDPALTPPRAPTPTPPQAPLP- 594
Query: 76 VVVSKSRS 53
SKSR+
Sbjct: 595 -APSKSRA 601
>01_05_0750 - 24895954-24896175,24896774-24897304,24897420-24897869
Length = 400
Score = 30.7 bits (66), Expect = 0.44
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = -3
Query: 260 GEGTTNGSADTAQ*SGNAFKALFDFIFVYTMVC*TGNILYVPGIVFAKTVERGVTKATES 81
G+ + G + SG AF + + + T + YV G+VF + R V
Sbjct: 252 GKESEEGGVENVTVSGAAFVGTENGLRIKTWGRAARSGAYVRGVVFEHALMRDV------ 305
Query: 80 RSRGVQIPESWCPNPGIHGVPXPES 6
S + I +S+CPN G G P S
Sbjct: 306 -SNPIIIDQSYCPNDGGQGCPHQSS 329
>02_01_0622 -
4658133-4658150,4658269-4658337,4658436-4658462,
4658808-4658873,4658954-4659076,4659562-4659629,
4659703-4659766,4659994-4660135,4660218-4660306,
4660574-4660637,4660870-4661021,4661124-4661261,
4661742-4661867,4661971-4662183,4662343-4662426,
4662583-4662742,4662993-4663126,4664047-4664136,
4664313-4664471,4665528-4665611,4666170-4666289,
4666338-4666391,4666899-4666945,4667556-4667598,
4667730-4668586,4668845-4668899
Length = 1081
Score = 29.9 bits (64), Expect = 0.77
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 133 ALSLPKLSSAESPKLPNPGVVVSKSRSHGVQIPESM 26
A LP + S SP PN V ++ S SHG +P S+
Sbjct: 135 AAPLPSVVSPLSPSAPNTAVALTVSTSHG-SVPSSL 169
>03_02_0350 - 7734494-7734952,7735765-7736133
Length = 275
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -1
Query: 271 AIFEVRAPPMAVPIPPNEVAMPSRPFSI----LSSSIPWSAKLEISFTCP 134
A E+ +PP +P PP ++ MP+ PFSI S+S+P + L F P
Sbjct: 139 ATLELPSPPPLMPAPP-QMPMPA-PFSISDLPSSTSVPTTVDLSALFDPP 186
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -1
Query: 250 PPMAVPIPPNEVAMPSRPFSILSSSIPW 167
P +++P+P + + PSRP L++++PW
Sbjct: 14 PAISLPLPCLQGSNPSRPSLGLTNALPW 41
>01_06_0259 + 27955005-27955436,27955685-27955822
Length = 189
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 46 HHDSGIWTPRLRDSVALVTPRSTVLAK 126
H +SG W PR SV +V +ST LA+
Sbjct: 116 HAESGYWRPRPDGSVEVVISQSTGLAE 142
>10_07_0110 +
12977702-12977958,12978374-12978527,12978661-12978798,
12978903-12979133,12979228-12979371,12979516-12979606,
12979798-12979868,12980014-12980128,12980313-12980431,
12980539-12980604,12980701-12980829,12980919-12981062,
12981522-12981704
Length = 613
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -2
Query: 159 NWKYPLRARHCLCQNCRARSHQSYRIPESWCPNPGVMVSKSRNPWCPKXGVMV 1
NW + C +C+ + R+ E +CP G +R C K G ++
Sbjct: 128 NWLSENTMQQLYCNSCQR--FLADRLVEGYCPTEGCNYDSARGDQCEKCGKLL 178
>07_03_1367 + 26072270-26072374,26074047-26074724
Length = 260
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 139 CPALSLPKLSSAESPKLPNPGVVVSKSRSHGVQIPESM 26
C ALS +A+ K+P G ++S S S+ + S+
Sbjct: 207 CTALSFDYCDNADKIKMPQSGYMISSSTSYNLAATRSI 244
>07_03_1155 - 24413270-24413728
Length = 152
Score = 27.5 bits (58), Expect = 4.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = -1
Query: 262 EVRAPPM-AVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLP 86
E +AP AVP P +P P L +P + + P ++P+L P+LP
Sbjct: 32 EEKAPHFPAVPELPPHPELPELPKPELPPPLPELPRPVVPELPPHPAVPELPPLPKPELP 91
Query: 85 NPGVVVSKSRSHGVQIPE 32
P VV + H V +PE
Sbjct: 92 -PHPVVPEMLPHPV-VPE 107
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 253 APPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAESPKLPNPGV 74
APP P PP++ A P+ + +P P +++P + +A P P PGV
Sbjct: 318 APPWVPPPPPSDPAFWHHPYMRGPAHVPTQG-------TPCMAMP-MPAARFPAPPVPGV 369
Query: 73 V 71
V
Sbjct: 370 V 370
>01_01_0315 +
2560337-2560675,2560737-2560781,2561630-2561749,
2562224-2562444,2562799-2562901,2562997-2563074,
2563176-2563267,2563377-2563439,2563527-2563749,
2563788-2563886
Length = 460
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 96 GDSALDSFGKDNAGHVKDISSLADHGIDEDKIEK 197
G D +G DN GH A+ G ++D+IE+
Sbjct: 147 GVDPADRYGSDNDGHSPRHYPQAEEGEEDDEIER 180
>07_01_0469 - 3552409-3553368
Length = 319
Score = 26.6 bits (56), Expect = 7.2
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 253 APPMAVPIPPNEVAMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAES---PKLPN 83
A P A P+PP A+P+ P + +P SA PA ++ SS P P+
Sbjct: 212 AAPAAPPVPPAAPAVPAAP---ALAPVPVSAPASALSFAPASAVRVPSSGNGGWLPATPS 268
Query: 82 PGVVVSKSRSHG 47
+S S S G
Sbjct: 269 GSRDLSSSSSSG 280
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 271 AIFEVRAPPMAVPIPPNEVAMPS 203
A+ V APP A+PI N AM S
Sbjct: 115 AVVSVVAPPAAIPITSNRPAMTS 137
>02_04_0221 -
21021886-21022144,21022227-21022345,21022681-21022920,
21023064-21023171,21023272-21023331,21023991-21024066,
21024155-21024360,21024722-21024784,21024925-21025012,
21025515-21026015,21027206-21027603
Length = 705
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 256 RAPPMAVPIPPNEVAMPSRPFSILSSS 176
R+P +P+PP VA S P S ++SS
Sbjct: 248 RSPSQPLPLPPVPVASSSIPSSSITSS 274
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 84 FGSFGDSA-LDSFGKDNAGHVKD-ISSLADHGIDEDKIE 194
F S G S+ L G +G +D ISSL DH I+ED E
Sbjct: 394 FTSEGSSSYLRRHGTSTSGLAQDLISSLHDHDIEEDDEE 432
>07_03_1071 + 23753883-23754752
Length = 289
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 250 PPMAVPIPPNE-VAMPSRPFSILSSSIPWSAK 158
PP + P P E V P+RP + +++ P SAK
Sbjct: 139 PPTSEPASPREDVIKPARPAAAAAAAEPGSAK 170
>05_01_0380 + 2978256-2979284
Length = 342
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 259 VRAPPMAVPIPPNEVAMPSRPFS 191
VR PP P PP P RPFS
Sbjct: 23 VRMPPPPPPPPPPPPPPPPRPFS 45
>04_04_0634 -
26777889-26778452,26778526-26778797,26778905-26779117,
26779497-26779578
Length = 376
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 136 PALSLPKLSSAESPKLPNPGVVVSKSRSHGVQ 41
P + LP+L ESPKLP ++V+ + S +Q
Sbjct: 263 PFMHLPRL---ESPKLPAADIIVATAASSALQ 291
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -1
Query: 235 PIPPNEVAMPSRPFSIL---SSSIPWSAKLEISFTCPAL-SLPKLSSA 104
PIP VA P RP ++ +SS S+ S +C A SLP +SA
Sbjct: 17 PIPSPPVAKPGRPLTVAACSNSSSSSSSSSPSSTSCSAAWSLPVATSA 64
>02_04_0066 + 19408431-19408865,19410540-19410620
Length = 171
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +2
Query: 17 LGH-HGFRDLDTMTPGFGHHD----SGIR*LW*LRARQFWQRQCRARKGYFQFS 163
LGH ++D+ T GF + G ++ + FW RQCR +G F+
Sbjct: 113 LGHWFSYKDMFRATNGFSYERLLGFGGFGRVYKAQEAVFWHRQCRYHQGENHFN 166
>01_06_0281 +
28155039-28155160,28155243-28155333,28155822-28155878,
28156174-28156221,28156399-28156449,28156529-28156572,
28156673-28156736,28156927-28157013,28157304-28157395,
28157489-28157539,28158592-28158641,28158717-28158781,
28158876-28159019,28159156-28159197
Length = 335
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 214 AMPSRPFSILSSSIPWSAKLEISFTCPALSLPKLSSAE 101
A+ RP +L SS + L+++ TCPA+ L KL E
Sbjct: 296 ALEYRPVKLLISSRELAESLKLNTTCPAV-LQKLLDRE 332
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,726,019
Number of Sequences: 37544
Number of extensions: 234423
Number of successful extensions: 900
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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