Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31701
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16) 119 1e-27
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 101 3e-22
SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14) 99 1e-21
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 56 2e-08
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 55 4e-08
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 55 4e-08
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 46 2e-05
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096) 43 1e-04
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 42 3e-04
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 40 0.001
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 38 0.005
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 38 0.005
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 37 0.011
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 36 0.020
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 35 0.035
SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 33 0.18
SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 32 0.24
SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 32 0.32
SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14) 30 0.98
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 30 0.98
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 28 5.3
SB_48953| Best HMM Match : NIF3 (HMM E-Value=1.7e-12) 28 5.3
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 27 6.9
SB_36048| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16)
Length = 168
Score = 119 bits (287), Expect = 1e-27
Identities = 61/125 (48%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Frame = +2
Query: 143 QSSRGSRK-AKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 319
+ +GS+K A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I KNDL+A FDSLG+L
Sbjct: 4 KGKKGSKKKAQRATSNVFAMFEQSQIQEFKEAFNMIDQNRDGFIDKNDLKAVFDSLGKLV 63
Query: 320 SEKELDEMVGEASGPINXTQXLTLFANRMCGGSDEDDVGXNAFKTXXEEGK--IDXXXLX 493
+++ +++M+ EASGPIN T LTLF ++ G+D +DV NAF + EGK ID L
Sbjct: 64 NDEYVEDMLNEASGPINFTMFLTLFGEKI-SGTDPEDVIRNAFGSFDLEGKGSIDEEKLK 122
Query: 494 HALMT 508
M+
Sbjct: 123 RLCMS 127
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 101 bits (243), Expect = 3e-22
Identities = 54/120 (45%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Frame = +2
Query: 161 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 340
++A R SNVF+MF Q Q+ EFKEAF ++D + DG I K DL SLG+ ++ L+E
Sbjct: 12 KRAHRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGKDPTDGYLEE 71
Query: 341 MVGEASGPINXTQXLTLFANRMCGGSDEDDVGXNAFKTXXEE--GKIDXXXLXHALMTWG 514
MV E+ GPIN T LTLF ++ G+D +DV NAF E+ G+I L A+M+ G
Sbjct: 72 MVKESPGPINFTMFLTLFGEKL-NGTDPEDVIRNAFACFDEDGNGRIHEDLLKEAMMSMG 130
>SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14)
Length = 133
Score = 99 bits (238), Expect = 1e-21
Identities = 50/104 (48%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Frame = +2
Query: 161 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 340
++A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I K DL+ + SLG+ +++ LD+
Sbjct: 12 KRAQRATSNVFAMFDQTQIQEFKEAFNMIDQNRDGFIDKEDLKDMYASLGKSPNDQFLDD 71
Query: 341 MVGEASG-PINXTQXLTLFANRMCGGSDEDDVGXNAFKTXXEEG 469
M+ EASG IN T LTLF ++ G+D +DV NAF EEG
Sbjct: 72 MIEEASGSTINFTMFLTLFGEKL-NGTDPEDVIKNAFGCFDEEG 114
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Frame = +2
Query: 203 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 370
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 371 XTQXLTLFANRMCGGSDEDDVGXNAFKTXXEEGK--IDXXXLXHALMTWG 514
+ LT+ A +M E+++ AF+ ++G I L H + G
Sbjct: 66 FPEFLTMMARKMKDTDSEEEI-REAFRVFDKDGNGFISAAELRHVMTNLG 114
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Frame = +2
Query: 182 SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA-- 355
S+V S++QVAE KEAF L D D G I ++L SLG+ +E+EL +M+ E
Sbjct: 278 SSVREKLSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEVDQ 337
Query: 356 --SGPINXTQXLTLFANRMCGGSDEDDVGXNAFKTXXEEG 469
+G I+ + L + A ++ E+++ +AFK + G
Sbjct: 338 DDNGEIDFPEFLQMVAKKIKETDTEEEI-QDAFKVFDKNG 376
Score = 40.7 bits (91), Expect = 7e-04
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
E ++AF++ D + DG+I ++L+ +LG ++ E+DEM+ EA
Sbjct: 364 EIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREA 408
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 54.8 bits (126), Expect = 4e-08
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Frame = +2
Query: 224 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINXTQXLTL 391
FKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+ + LT+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 392 FANRMCGGSDEDDVGXNAFKTXXEEGK--IDXXXLXHALMTWG 514
A +M E+++ AF+ ++G I L H + G
Sbjct: 62 MARKMKNTDSEEEI-REAFRVFDKDGNGFISAAELRHVMTNLG 103
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 118
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 54.8 bits (126), Expect = 4e-08
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Frame = +2
Query: 224 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINXTQXLTL 391
FKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+ + LT+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 392 FANRMCGGSDEDDVGXNAFKTXXEEGK--IDXXXLXHALMTWG 514
A +M E+++ AF+ ++G I L H + G
Sbjct: 62 MARKMKNTDSEEEI-REAFRVFDKDGNGFISAAELRHVMTNLG 103
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 118
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/89 (29%), Positives = 51/89 (57%)
Frame = +2
Query: 203 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINXTQX 382
S+ Q+AE+KEAF + D+D++G I ++L + +LG+ +E + +M+ A + T+
Sbjct: 5 SKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPTEDMIRDMIASA----DRTEF 60
Query: 383 LTLFANRMCGGSDEDDVGXNAFKTXXEEG 469
L++ G + E + AFK+ ++G
Sbjct: 61 LSMMCTVQSGKTQEIRM---AFKSMDKDG 86
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
E + AF+ MD D DG I DL+ T S+ +L M+ +A
Sbjct: 74 EIRMAFKSMDKDGDGFITFGDLKKTMQECDENLSDDDLKRMIIDA 118
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +2
Query: 203 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPIN 370
+++Q+ EFK AF D + DG I +L S+G ++EL M+ +A SG I+
Sbjct: 10 TEEQIREFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDID 69
Query: 371 XTQXLTLFANRMCGGSDEDDVGXNAFKTXXEEG 469
+ + L A++ + E D+ AF ++G
Sbjct: 70 LPEFIELMASKSKNDTTESDL-REAFSLFDKDG 101
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINXTQXLT 388
EFK AF D + DG I +L S+G ++EL M+ +A SG I+ + +
Sbjct: 145 EFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIE 204
Query: 389 LFANRMCGGSDEDDVGXNAFKTXXEEG 469
L A++ + E D+ AF ++G
Sbjct: 205 LMASKSKNDTTESDL-REAFSLFDKDG 230
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 218 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
++ +EAF L D D +G+I +++ F +G +EKE E+V +A
Sbjct: 88 SDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELVKQA 133
Score = 34.3 bits (75), Expect = 0.060
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 218 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
++ +EAF L D D +G+I +++ +G +EKE E+V +A
Sbjct: 217 SDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELVKQA 262
>SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096)
Length = 322
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 278 NDLRATFDSLGRLASEKELDEMVGEASGPINXTQXLTLFANRMCGGSDEDDVGXNAFKTX 457
+DLR T SLG+ + +E+D+M+ E N T L++F RM +D +D+ AF
Sbjct: 178 DDLRGTLSSLGQKPTFEEIDDMM-EGKPSFNFTSFLSMFGLRM-ANTDPEDIILRAFSCL 235
Query: 458 XE--EGKIDXXXLXHALMTWG 514
+ +GK+ L L T G
Sbjct: 236 DDGGDGKLSAKMLRELLTTMG 256
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +2
Query: 218 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINXTQXL 385
A++KEAF + D D G + +L +LG +E+E+ EMV E +G ++ + +
Sbjct: 148 AQYKEAFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFV 207
Query: 386 TLFANRMCGGSDEDDVGXNAFKTXXEEGK 472
L N+ +E D+ NAF + K
Sbjct: 208 DLMENQKKPDEEEQDL-INAFHVFDSDDK 235
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +2
Query: 218 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
AE +EAF++ D + DG I + +LR+ SLG S+ E+ EM+ EA
Sbjct: 73 AEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREA 118
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +2
Query: 197 MFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 355
M Q E +EAF++ D D +G I +LR +LG +++E++EM+ EA
Sbjct: 41 MGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEA 93
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 203 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 352
++ QV E KEAF + D + DG I +L+ SLG +E EL +M+ +
Sbjct: 207 TESQVREIKEAFLVFDDNGDGCITATELKKLVTSLGYNITEAELMDMMNQ 256
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 215 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 352
++++++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 47 ISKYRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 92
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 36.7 bits (81), Expect = 0.011
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EASGPINXTQXLT 388
++++AF+ D D G I +L SLG +E EL +M+ + +G +N + +
Sbjct: 51 KYRDAFEHFDKDSSGSITTRELGGIMRSLGENPTEIELQDMINSVDCDGNGLMNFDEFVK 110
Query: 389 LFANRMCGGSDEDDVGXNAFKTXXEEGK 472
L + DE+D+ AF+ +G+
Sbjct: 111 LMITKNQFMMDEEDM-LEAFRMFDRDGR 137
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 224 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 352
+++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 2 YRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 44
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 224 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE-MVG 349
F E F++ D + +G+IG +LR SLG S++E+D MVG
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNLMVG 49
>SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 203 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSL-GRLASEKELDEMVGEAS 358
SQ+Q +AFQL D G + K+DL+ F L G S E+ E++ +++
Sbjct: 6 SQEQKTNILQAFQLADKTSKGYLDKHDLKVAFVYLFGYKPSSYEVQELMNKSN 58
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 137 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 310
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 137 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 310
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = +2
Query: 194 SMFSQKQVA---EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEM---VGEA 355
S + +KQ EF E ++ D D G + +LR+ SLG S++E+ + V ++
Sbjct: 578 SAYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPVDDS 637
Query: 356 SGPIN 370
SG IN
Sbjct: 638 SGHIN 642
>SB_14508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1392
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +2
Query: 200 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSL--GRLASEKELDEMVGEA----SG 361
F K + +AF + D DK G + L+A F+S+ E+E+ ++ A G
Sbjct: 801 FYHKTDTDILDAFHVFDRDKMGYFDLDKLKAAFESMPDSDTIDEEEMASLIAIADSNQDG 860
Query: 362 PINXTQXLTLFANRMCGGSDEDDV 433
+ + + G D DDV
Sbjct: 861 KVYFQDSYNRYVDNQDNGDDNDDV 884
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP 364
+ +AF+++D DK G + +L G +++E++EM+ A P
Sbjct: 63 QLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDP 110
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 31.9 bits (69), Expect = 0.32
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +2
Query: 221 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV 346
+F ++ ++ D+D G+I + +LR +LG ++ E+D ++
Sbjct: 87 DFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLI 128
>SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14)
Length = 227
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 227 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPIN 370
K+AF + D +KDG I + D R +S +E++ E++ + P+N
Sbjct: 162 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKID-PMN 208
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 227 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPIN 370
K+AF + D +KDG I + D R +S +E++ E++ + P+N
Sbjct: 462 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKID-PMN 508
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.9 bits (64), Expect = 1.3
Identities = 30/90 (33%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Frame = +3
Query: 252 TTRMASSARTTCAPPSTPWAGSRPRRSSMRWSVRLLAPSTXLXX*LCS----PTACAAAL 419
+T A S +T + PSTP S P S + PST + S P+A +
Sbjct: 124 STPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPS--TPSTPITPGTPSTPSTPSAPGTPI 181
Query: 420 TKMTXVSTPSRPXXKRERSIXXXSXTPS*P 509
T T +STPS P RS TPS P
Sbjct: 182 TPST-LSTPSTPSTPSTRSTPSTPSTPSTP 210
Score = 27.9 bits (59), Expect = 5.3
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +3
Query: 270 SARTTCAPPSTPWAGSRPRRSSMRWSVRLLAPSTXLXX*LCS----PTACAAALTKMTXV 437
S +T + PSTP S P S + PST + S P+A +T T +
Sbjct: 680 STPSTPSTPSTPSTPSMPNTPSTPSTPS--TPSTPITPGTPSTPSTPSAPGTPITPST-L 736
Query: 438 STPSRPXXKRERSIXXXSXTPS*P 509
STPS P RS TPS P
Sbjct: 737 STPSTPSTPSTRSTPSTPSTPSTP 760
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = +3
Query: 252 TTRMASSARTTCAPPSTPWAGSRPRRSSMRWSVRLLA-PSTXLXX*LCSPTACAAALTKM 428
+T S T + PSTP S P S+ + + PST S + + +
Sbjct: 423 STPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTP 482
Query: 429 TXVSTPSRPXXKRERSIXXXSXTPS*PG 512
+ STPS P S TPS PG
Sbjct: 483 STPSTPSTPSTSSTPSTPSTPSTPSAPG 510
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 176 TGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 352
T +FS++Q+ EF++AF + + D I + SLG E E+ E + E
Sbjct: 213 TDQEAAKLFSREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNPPEHEVWEYLNE 271
>SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 137 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGI 268
D + + GS K T ++ FS+K+ + +A HD DG+
Sbjct: 196 DLREAYGSSTTKETSASQRVEFSRKKKGSYTDAIPSSTHDNDGM 239
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 203 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 310
+++Q+ EF+ +F D D+ G + N+ + SLG
Sbjct: 512 TEEQMKEFRASFNFFDKDQTGKLEPNEFKQCLVSLG 547
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 179 GSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS 358
G ++ S S++ + + AF++ D D G + K ++ S+ RLA E+ ++ + +
Sbjct: 91 GLSIISRGSKE--TKLRWAFEIYDSDGSGEVSKKEMLEIVRSIFRLAGEEVTAKLPRDEN 148
Query: 359 GPINXTQXLTL 391
P T L L
Sbjct: 149 TPEKFTSKLFL 159
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 191 FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV 346
+S Q + EF E + D++ DG + LR SLG + + D +V
Sbjct: 72 YSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQADAIV 123
>SB_48953| Best HMM Match : NIF3 (HMM E-Value=1.7e-12)
Length = 288
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 341 MVGEASGPINXTQXLTLFANRM-CGG 415
M+GE P+N T+ L N+M CGG
Sbjct: 166 MIGEFETPMNETEFLAFVKNKMQCGG 191
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 260 DGIIGKNDLRATFDSLGRLASEKELDEMV 346
+G + ND++ F + G S+KE+DE +
Sbjct: 2942 NGTLSYNDIKEYFKACGHQPSQKEIDEAI 2970
>SB_36048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 258 RMASSARTTCAPPSTP-WAGSRPRRSSM 338
R + +T+CAPP+ P G RP RS M
Sbjct: 202 RGSPKTKTSCAPPAPPRRIGRRPGRSRM 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,013,046
Number of Sequences: 59808
Number of extensions: 192019
Number of successful extensions: 614
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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