Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31691
         (334 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   2.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   7.8  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 82  VSPFXYKPXRYVADPGRYDPIR 147
           +S   Y P  Y  DP +YDP R
Sbjct: 393 ISGLHYDP-EYYPDPEKYDPER 413


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +1

Query: 97  YKPXRYVADPGRYDPIR---DNSGRYIP 171
           ++  +Y  DP ++DP R   +N  + +P
Sbjct: 384 HRDPQYFPDPEKFDPERFSDENKAKIVP 411


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 6   PVSDSGAGRRNWKXHSF 56
           P   SG GR+ WK   F
Sbjct: 72  PRFSSGVGRKAWKHLDF 88


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 6   PVSDSGAGRRNWKXHSF 56
           P   SG GR+ WK   F
Sbjct: 72  PRFSSGVGRKAWKHLDF 88


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -1

Query: 319 PCKHHQGIC 293
           PCKH   IC
Sbjct: 424 PCKHLDAIC 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,103
Number of Sequences: 336
Number of extensions: 1009
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)