Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31691
         (334 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07862-1|CAA30710.1|  102|Homo sapiens protein ( Human mRNA for ...    28   6.0  

>X07862-1|CAA30710.1|  102|Homo sapiens protein ( Human mRNA for
           protamine 2. ).
          Length = 102

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 247 QYRIQCRSHRRXXGLHGXRCRHQSCRECNGQSCR 146
           QYR +  S RR   +H  R +H+SCR    +SCR
Sbjct: 52  QYRRRHCSRRRLHRIH--RRQHRSCRRRKRRSCR 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,389,118
Number of Sequences: 237096
Number of extensions: 606420
Number of successful extensions: 1035
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)