Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31691
         (334 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15350.1 68417.m02347 cytochrome P450 family protein contains...    27   3.1  
At3g52970.1 68416.m05839 cytochrome P450 family protein cytochro...    27   4.1  
At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein / antiterm...    27   4.1  
At5g42620.1 68418.m05188 expressed protein                             26   5.5  
At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51) ide...    26   7.2  

>At4g15350.1 68417.m02347 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 509

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 88  PFXYKPXRY--VADPGRYDPIRDNSGRYIPDNSG 183
           P  +KP R+  ++  G+ D IRD   +YIP  SG
Sbjct: 411 PDEFKPERFLSISRSGQEDEIRDKFLKYIPFASG 444


>At3g52970.1 68416.m05839 cytochrome P450 family protein cytochrome
           P450 76A2, eggplant, PIR:S38534
          Length = 516

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +1

Query: 82  VSPFXYKPXRYVADPGRYDPIRDNSGRYIPDNSG 183
           + P  +KP R+++DP   D  +     ++P  SG
Sbjct: 420 IDPIMFKPERFISDPDARD-FKGQDYEFLPFGSG 452


>At3g13180.1 68416.m01649 NOL1/NOP2/sun family protein /
          antitermination NusB domain-containing protein low
          similarity to SP|P36929 SUN protein (FMU protein)
          {Escherichia coli}; contains Pfam profiles PF01189:
          NOL1/NOP2/sun family, PF01029: NusB family
          Length = 523

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 7  LSLTVALAAETGKXTPFQYNRXYSTVSPF 93
          LS  V L+AET K +P  + R   T  PF
Sbjct: 5  LSFRVYLSAETQKASPGSFKRTQKTRKPF 33


>At5g42620.1 68418.m05188 expressed protein
          Length = 841

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -1

Query: 208 GLHGXRCRHQSC-RECNG 158
           G HG  CR++SC   CNG
Sbjct: 623 GYHGHDCRNRSCPNNCNG 640


>At1g11680.1 68414.m01341 obtusifoliol 14-demethylase (CYP51)
           identical to obtusifoliol 14-demethylase (GI:14624983)
           [Arabidopsis thaliana]
          Length = 488

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +1

Query: 22  ALAAETGKXTPFQYNRXYSTVSPFXYKPXRYVADPGRYDPIRDNSGRYIPDNSGAYN 192
           ++ A  GK          +T   F  +      DP  YDP R + GR     +GA++
Sbjct: 366 SVTARDGKTYDIPKGHIVATSPAFANRLPHIFKDPDTYDPERFSPGREEDKAAGAFS 422


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.316    0.136    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,424,762
Number of Sequences: 28952
Number of extensions: 79090
Number of successful extensions: 170
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)