Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31684
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   0.88 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   4.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   4.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   4.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = +1

Query: 184 KRQHGVCIT---SIIIKLPDYKHQYL 252
           +  + VC+    S++IKL DY HQ L
Sbjct: 115 QNSNDVCLAIPESLVIKLVDYHHQLL 140


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 423 SLNKYRRHVKTLVEINLKEV 482
           SLN  RR   TL+++NL +V
Sbjct: 307 SLNIARRVQVTLLQVNLSQV 326


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 423 SLNKYRRHVKTLVEINLKEV 482
           SLN  RR   TL+++NL +V
Sbjct: 307 SLNIARRVQVTLLQVNLSQV 326


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 423 SLNKYRRHVKTLVEINLKEV 482
           SLN  RR   TL+++NL +V
Sbjct: 307 SLNIARRVQVTLLQVNLSQV 326


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 170 IEDFLNANMAYVSPV**LNYRTINTNIWFEN 262
           ++DFL+   A++  V  L+   I+ +IW  N
Sbjct: 209 LQDFLSHQHAWIWLVWLLSQAWISVHIWSPN 239


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 170 IEDFLNANMAYVSPV**LNYRTINTNIWFEN 262
           ++DFL+   A++  V  L+   I+ +IW  N
Sbjct: 442 LQDFLSHQHAWIWLVWLLSQAWISVHIWSPN 472


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 170 IEDFLNANMAYVSPV**LNYRTINTNIWFEN 262
           ++DFL+   A++  V  L+   I+ +IW  N
Sbjct: 442 LQDFLSHQHAWIWLVWLLSQAWISVHIWSPN 472


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,714
Number of Sequences: 336
Number of extensions: 2277
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)