Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31684
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.4  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   3.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   3.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -1

Query: 296 IRNIISFLLNTNFQTKY 246
           + NI ++++NTN+ +KY
Sbjct: 194 MNNIETYIVNTNYSSKY 210


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = -1

Query: 224 LIIILVIHTPCWRLRNLQFSFKQSFHIKQLTVGSLDIVQSVQMEQYFQITY 72
           ++++L+IH    R++++  ++K  +         LDI++++  E   Q  +
Sbjct: 154 IVMVLIIHPGDPRIKSVVTAYKADYTKISTLDAILDIIRNMVPENLVQACF 204


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 223 KLPDYKHQYLV*KLVFNKKEMIF 291
           ++ DY H Y + +  +NK E+I+
Sbjct: 424 RIIDYYHSYKMHQKPYNKDEIIY 446


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 223 KLPDYKHQYLV*KLVFNKKEMIF 291
           ++ DY H Y + +  +NK E+I+
Sbjct: 424 RIIDYYHSYKMHQKPYNKDEIIY 446


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 365 YSTLQVIKNQNNLSMK 412
           +S   VI N+NN SMK
Sbjct: 483 FSYTIVINNRNNTSMK 498


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,352
Number of Sequences: 438
Number of extensions: 2854
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)