Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31683
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Re... 91 2e-17
UniRef50_UPI0000E48440 Cluster: PREDICTED: similar to troponin I... 62 7e-09
UniRef50_Q7M3Y3 Cluster: Troponin I; n=5; Pectinidae|Rep: Tropon... 62 1e-08
UniRef50_Q5DDC3 Cluster: SJCHGC00516 protein; n=4; Schistosoma j... 60 3e-08
UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep: ... 60 4e-08
UniRef50_Q8WPC1 Cluster: Adult cardiac troponin I; n=9; Ascidiac... 59 5e-08
UniRef50_Q71N42 Cluster: Fast muscle troponin I; n=31; Euteleost... 53 4e-06
UniRef50_P50754 Cluster: Troponin I, cardiac muscle; n=18; Tetra... 52 8e-06
UniRef50_P48788 Cluster: Troponin I, fast skeletal muscle; n=15;... 51 2e-05
UniRef50_P19429 Cluster: Troponin I, cardiac muscle; n=108; Chor... 50 3e-05
UniRef50_Q4RGJ1 Cluster: Chromosome undetermined SCAF15099, whol... 49 7e-05
UniRef50_Q9NDR9 Cluster: Troponin I; n=1; Branchiostoma belcheri... 48 1e-04
UniRef50_Q4RGJ7 Cluster: Chromosome undetermined SCAF15099, whol... 40 0.025
UniRef50_Q6AHQ1 Cluster: Troponin t protein 3, isoform b; n=9; R... 39 0.059
UniRef50_P45379 Cluster: Troponin T, cardiac muscle; n=294; Eute... 39 0.059
UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc... 37 0.24
UniRef50_Q25148 Cluster: Troponin T; n=2; Halocynthia roretzi|Re... 36 0.72
UniRef50_P45378 Cluster: Troponin T, fast skeletal muscle; n=64;... 35 1.3
UniRef50_Q23D13 Cluster: Viral A-type inclusion protein repeat c... 34 1.7
UniRef50_A2DGN0 Cluster: Viral A-type inclusion protein, putativ... 34 1.7
UniRef50_Q27371 Cluster: Troponin T; n=6; Chromadorea|Rep: Tropo... 33 3.9
UniRef50_A2DVU2 Cluster: CAMK family protein kinase; n=1; Tricho... 33 5.1
UniRef50_A4MI06 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q75E63 Cluster: ABL193Cp; n=1; Eremothecium gossypii|Re... 32 6.8
UniRef50_Q237L2 Cluster: Kinesin motor domain containing protein... 32 8.9
UniRef50_Q08EW3 Cluster: Oncosphere protein Tso22a; n=9; Platyhe... 32 8.9
UniRef50_A5ULC6 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
>UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Rep:
Troponin I - Drosophila melanogaster (Fruit fly)
Length = 269
Score = 90.6 bits (215), Expect = 2e-17
Identities = 38/68 (55%), Positives = 52/68 (76%)
Frame = +3
Query: 312 CGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGK 491
CG P+N+ DA+E ++ +C++Y+ER+ E +K+DLEY +KD EI DLN+QVNDLRGK
Sbjct: 139 CGSPRNLSDASEGELQEICEEYYERMYICEGQKWDLEYEVRKKDWEINDLNAQVNDLRGK 198
Query: 492 FVKPTLXK 515
FVKP L K
Sbjct: 199 FVKPALKK 206
>UniRef50_UPI0000E48440 Cluster: PREDICTED: similar to troponin I,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to troponin I, partial -
Strongylocentrotus purpuratus
Length = 312
Score = 62.1 bits (144), Expect = 7e-09
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFV 497
KP +ID + D ++ +C++ E++ E KFDLE I ++D+EI D+ + N+ RGKF
Sbjct: 230 KPLSIDSLSRDRLRALCEELTEQLTDAEGNKFDLEVIIRKQDLEIEDMKVRANEARGKFE 289
Query: 498 KPTLXK 515
+P L K
Sbjct: 290 RPELKK 295
>UniRef50_Q7M3Y3 Cluster: Troponin I; n=5; Pectinidae|Rep: Troponin
I - Chlamys nipponensis akazara (Akazara scallop)
(Japanese scallop)
Length = 292
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +3
Query: 321 PK-NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFV 497
PK + D + ++ +CKD+H+R+A LE++ +D E ++D EI +L +VND +GKFV
Sbjct: 184 PKFSTDGKDVAALQALCKDFHKRLASLEEDVYDWEAKIRKQDFEINELTLKVNDTKGKFV 243
Query: 498 KPTLXK 515
KP L K
Sbjct: 244 KPVLRK 249
>UniRef50_Q5DDC3 Cluster: SJCHGC00516 protein; n=4; Schistosoma
japonicum|Rep: SJCHGC00516 protein - Schistosoma
japonicum (Blood fluke)
Length = 221
Score = 60.1 bits (139), Expect = 3e-08
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFV 497
+P +D E+ + K +ER+ +LE +K+D E R+D EI +L +VND++GKFV
Sbjct: 108 EPLKLDGLGENDLNAKVKQLYERVRQLEGDKYDWEEKLRRQDFEINELTIKVNDVKGKFV 167
Query: 498 KPTLXK 515
KP L K
Sbjct: 168 KPVLKK 173
>UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep:
Troponin I 3 - Caenorhabditis elegans
Length = 260
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 327 NIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKP 503
++D N+ + ++ +D R+ LE+EKFD+ + + + EI L QVNDLRGKFVKP
Sbjct: 97 DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKP 156
Query: 504 TLXK 515
TL K
Sbjct: 157 TLKK 160
>UniRef50_Q8WPC1 Cluster: Adult cardiac troponin I; n=9;
Ascidiacea|Rep: Adult cardiac troponin I - Halocynthia
roretzi (Sea squirt)
Length = 260
Score = 59.3 bits (137), Expect = 5e-08
Identities = 22/63 (34%), Positives = 42/63 (66%)
Frame = +3
Query: 327 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPT 506
N+ +E +K +C++ H +I +++++++D+E + D EI DLN ++ DLRGKF +P
Sbjct: 132 NLGGMSEQDLKDLCRELHAKIEKVDEQRYDIEVKVNKNDQEIEDLNQRIFDLRGKFKRPP 191
Query: 507 LXK 515
L +
Sbjct: 192 LRR 194
>UniRef50_Q71N42 Cluster: Fast muscle troponin I; n=31;
Euteleostomi|Rep: Fast muscle troponin I - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 176
Score = 52.8 bits (121), Expect = 4e-06
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPTLXK 515
++ +CK H++I ++++E++D+E + D EI DL +V DL+GKF KP L K
Sbjct: 57 LQDLCKKLHQQIDKVDEERYDMEAKVAKADKEIEDLKVKVIDLKGKFKKPALKK 110
>UniRef50_P50754 Cluster: Troponin I, cardiac muscle; n=18;
Tetrapoda|Rep: Troponin I, cardiac muscle - Xenopus
laevis (African clawed frog)
Length = 244
Score = 52.0 bits (119), Expect = 8e-06
Identities = 21/66 (31%), Positives = 40/66 (60%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFV 497
+P + + ++ +C++ H RI +++E++D+E + E+ DLN ++ DLRGKF
Sbjct: 106 QPLQLSGLSRSELQDLCQELHARIDVVDEERYDMEAKVNKNITELEDLNQKIFDLRGKFK 165
Query: 498 KPTLXK 515
KP L +
Sbjct: 166 KPNLRR 171
>UniRef50_P48788 Cluster: Troponin I, fast skeletal muscle; n=15;
Eutheria|Rep: Troponin I, fast skeletal muscle - Homo
sapiens (Human)
Length = 182
Score = 50.8 bits (116), Expect = 2e-05
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPTLXK 515
++ +CK H +I E+EK+D+E + E+ D+N ++ DLRGKF +P L +
Sbjct: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRR 114
>UniRef50_P19429 Cluster: Troponin I, cardiac muscle; n=108;
Chordata|Rep: Troponin I, cardiac muscle - Homo sapiens
(Human)
Length = 210
Score = 50.0 bits (114), Expect = 3e-05
Identities = 19/54 (35%), Positives = 36/54 (66%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPTLXK 515
++ +C+ H R+ ++++E++D+E + EI DL ++ DLRGKF +PTL +
Sbjct: 93 LQDLCRQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRR 146
>UniRef50_Q4RGJ1 Cluster: Chromosome undetermined SCAF15099, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF15099, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 199
Score = 48.8 bits (111), Expect = 7e-05
Identities = 19/56 (33%), Positives = 37/56 (66%)
Frame = +3
Query: 348 DTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPTLXK 515
D+++ +C+ H++I +++E++D+E + + EI DL S+V DL GK+ K + K
Sbjct: 38 DSMQELCRKLHKQIDLVDEERYDMELKVKKSNKEINDLKSKVQDLNGKYFKKPVLK 93
>UniRef50_Q9NDR9 Cluster: Troponin I; n=1; Branchiostoma
belcheri|Rep: Troponin I - Branchiostoma belcheri
(Amphioxus)
Length = 180
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +3
Query: 321 PKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVK 500
P + D ++ +C+ H +I + E+EK+D+E D E+ DL ++ L GKF K
Sbjct: 50 PISTSGLGHDELEELCRRLHAQITKAEEEKYDVEQKVEINDKELADLTQRMYSLTGKFKK 109
Query: 501 PTLXK 515
P L +
Sbjct: 110 PQLKR 114
>UniRef50_Q4RGJ7 Cluster: Chromosome undetermined SCAF15099, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF15099, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 334
Score = 40.3 bits (90), Expect = 0.025
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFV 497
KP N+D+ ++D ++ K+ E + LE+ KFD R+ E+ L +++++L+
Sbjct: 262 KPLNVDNLSDDKLRETAKELWELLYNLEEIKFDHCEKLKRQRYEVISLRNRIDELQKHLE 321
Query: 498 KPTLXK 515
K T+ K
Sbjct: 322 KMTVGK 327
>UniRef50_Q6AHQ1 Cluster: Troponin t protein 3, isoform b; n=9;
Rhabditida|Rep: Troponin t protein 3, isoform b -
Caenorhabditis elegans
Length = 1178
Score = 39.1 bits (87), Expect = 0.059
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 327 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQ 470
N + + +K K+ H+RI +LE EK+DLE R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>UniRef50_P45379 Cluster: Troponin T, cardiac muscle; n=294;
Euteleostomi|Rep: Troponin T, cardiac muscle - Homo
sapiens (Human)
Length = 298
Score = 39.1 bits (87), Expect = 0.059
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 330 IDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVND 479
ID NED ++ K+ + I LE EKFDL+ ++ EI L +++ND
Sbjct: 231 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRIND 280
>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
Pancrustacea|Rep: Troponin T, skeletal muscle -
Drosophila melanogaster (Fruit fly)
Length = 397
Score = 37.1 bits (82), Expect = 0.24
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNS-QVNDLRGKF 494
KP I+ E ++ ++ E I +LE EK+DLE R+D ++ +L Q LR K
Sbjct: 185 KPLAIEGFGEAKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKA 244
Query: 495 VKPTL 509
+K L
Sbjct: 245 LKKGL 249
>UniRef50_Q25148 Cluster: Troponin T; n=2; Halocynthia roretzi|Rep:
Troponin T - Halocynthia roretzi (Sea squirt)
Length = 248
Score = 35.5 bits (78), Expect = 0.72
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 327 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVK 500
++D + D ++ ++ + + LE+EK D E R+ ++ L +VN+ GK+ K
Sbjct: 170 SVDHLSPDKLREKAQELWDLLYSLEEEKIDYEVRIDRQKYDLNQLRQRVNEYMGKYSK 227
>UniRef50_P45378 Cluster: Troponin T, fast skeletal muscle; n=64;
Euteleostomi|Rep: Troponin T, fast skeletal muscle -
Homo sapiens (Human)
Length = 269
Score = 34.7 bits (76), Expect = 1.3
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVN 476
KP NID ED ++ K+ E + +LE +KF+ R+ +I L S+++
Sbjct: 195 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRID 247
>UniRef50_Q23D13 Cluster: Viral A-type inclusion protein repeat
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Viral A-type inclusion protein repeat
containing protein - Tetrahymena thermophila SB210
Length = 1753
Score = 34.3 bits (75), Expect = 1.7
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 333 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVK 500
D A E+ + ERI LE KFDLE K+ E L QVN+ + + K
Sbjct: 1105 DQAKEERSNSTLTEKEERIQNLEKSKFDLESSLQDKENECERLVQQVNNFQQQVKK 1160
>UniRef50_A2DGN0 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 4263
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 369 KDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVN 476
K+ E A+LE+EK + KD EI DL SQ+N
Sbjct: 2484 KNLEEEKAKLEEEKAQAQKTIEEKDQEIEDLTSQIN 2519
>UniRef50_Q27371 Cluster: Troponin T; n=6; Chromadorea|Rep: Troponin
T - Caenorhabditis elegans
Length = 405
Score = 33.1 bits (72), Expect = 3.9
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNS-QVNDLRGKFVKPTL 509
+K + H RI +LE EK+DLE R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGL 284
>UniRef50_A2DVU2 Cluster: CAMK family protein kinase; n=1;
Trichomonas vaginalis G3|Rep: CAMK family protein kinase
- Trichomonas vaginalis G3
Length = 1077
Score = 32.7 bits (71), Expect = 5.1
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 324 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLR 485
+N +++ KR+ +D HER+ R EDE+ + I R+ E + +Q+ L+
Sbjct: 813 RNKIQSDDSDRKRLYQDEHERLRREEDERMKRQRIEDRQQEESHRIMNQIQKLQ 866
>UniRef50_A4MI06 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 404
Score = 32.3 bits (70), Expect = 6.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 315 GKPKNIDDANEDTIKRVCKDYHERIARL 398
G+P +D+ + +KRVC+DY E + R+
Sbjct: 158 GRPYALDEQRDLVLKRVCRDYEEAVNRI 185
>UniRef50_Q75E63 Cluster: ABL193Cp; n=1; Eremothecium gossypii|Rep:
ABL193Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 862
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 369 KDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVND 479
KD E ++RL++E LE +KD EI LN +ND
Sbjct: 194 KDLREEMSRLQEELAALENRQLKKDGEISQLNRTLND 230
>UniRef50_Q237L2 Cluster: Kinesin motor domain containing protein;
n=2; Tetrahymena thermophila|Rep: Kinesin motor domain
containing protein - Tetrahymena thermophila SB210
Length = 2307
Score = 31.9 bits (69), Expect = 8.9
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 348 DTIKRVCKDYHERIARLEDEKFDLE-YIXXRKDMEIXDLNSQVNDLRG 488
D ++++ DY E+I RL+++ +DLE I K + N QV RG
Sbjct: 2091 DNLRKINYDYKEKIDRLQEQLYDLEDEIEKEKSVISQQQNEQVFQERG 2138
>UniRef50_Q08EW3 Cluster: Oncosphere protein Tso22a; n=9;
Platyhelminthes|Rep: Oncosphere protein Tso22a - Taenia
solium (Pork tapeworm)
Length = 363
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDL 482
+P ID + ++ K+ ++ I RLE +K+DLE R+ ++ +L + +
Sbjct: 204 QPLQIDGLKGEQLRAKAKELNDIILRLEGDKYDLEQRFSRQSYDMQELAERARQM 258
>UniRef50_A5ULC6 Cluster: Putative uncharacterized protein; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Putative
uncharacterized protein - Methanobrevibacter smithii
(strain PS / ATCC 35061 / DSM 861)
Length = 307
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3
Query: 324 KNIDDANEDTIKRVC--KDYHERIARL--EDEKFDLEYIXXRKDMEIXDLNSQVNDLRGK 491
K D ++ + RV ++Y E + +D+ + E I +KD +I DLN+Q+N L+
Sbjct: 38 KKEDPFEDNDLVRVLSSEEYEELVGNQFSQDKLNEYEEIINKKDNQIADLNNQINILKNS 97
Query: 492 F 494
F
Sbjct: 98 F 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,217,481
Number of Sequences: 1657284
Number of extensions: 4569226
Number of successful extensions: 15108
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15101
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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