Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31683
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 67 8e-12
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 67 8e-12
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 61 5e-10
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 61 5e-10
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 60 1e-09
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 58 4e-09
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 39 0.002
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 38 0.006
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 38 0.006
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 35 0.030
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 35 0.030
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 34 0.069
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 33 0.12
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 33 0.12
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 4.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 4.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 4.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 4.6
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 6.0
AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical ... 27 8.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 66.9 bits (156), Expect = 8e-12
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +3
Query: 342 NEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPTLXK 515
NED ++ V + ER+ LE E +D+ YI +KD EI +L VNDLRGKFVKPTL K
Sbjct: 87 NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPTLKK 144
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 66.9 bits (156), Expect = 8e-12
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +3
Query: 342 NEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPTLXK 515
NED ++ V + ER+ LE E +D+ YI +KD EI +L VNDLRGKFVKPTL K
Sbjct: 87 NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPTLKK 144
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 60.9 bits (141), Expect = 5e-10
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +3
Query: 327 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPT 506
+IDD + ++++ D R+ +LE+EK+D+ Y+ + + EI L +VNDLRGKFVKP+
Sbjct: 88 SIDDKGQ--LEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRGKFVKPS 145
Query: 507 LXK 515
L K
Sbjct: 146 LKK 148
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 60.9 bits (141), Expect = 5e-10
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +3
Query: 327 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPT 506
+IDD + ++++ D R+ +LE+EK+D+ Y+ + + EI L +VNDLRGKFVKP+
Sbjct: 88 SIDDKGQ--LEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRGKFVKPS 145
Query: 507 LXK 515
L K
Sbjct: 146 LKK 148
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 327 NIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKP 503
++D N+ + ++ +D R+ LE+EKFD+ + + + EI L QVNDLRGKFVKP
Sbjct: 97 DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKP 156
Query: 504 TLXK 515
TL K
Sbjct: 157 TLKK 160
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +3
Query: 327 NIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKP 503
++D N+ + ++ +D R+ LE+EKFD+ + + + EI L QVNDLRGKFVKP
Sbjct: 97 DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKP 156
Query: 504 TLXK 515
TL K
Sbjct: 157 TLKK 160
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 327 NIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKP 503
N+D ++ ++ + D R+ LE+EK+D+ +I + I LN +VNDLRGKFVKP
Sbjct: 97 NVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVNDLRGKFVKP 156
Query: 504 TLXK 515
+L K
Sbjct: 157 SLKK 160
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 327 NIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKP 503
N+D ++ ++ + D R+ LE+EK+D+ +I + I LN +VNDLRGKFVKP
Sbjct: 97 NVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVNDLRGKFVKP 156
Query: 504 TLXK 515
+L K
Sbjct: 157 SLKK 160
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 327 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQ 470
N + + +K K+ H+RI +LE EK+DLE R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDL-RGKF 494
K +++ + +K K H RI +LE EK+DLE R++ ++ +LN + + R K
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 184
Query: 495 VKPTL 509
+K L
Sbjct: 185 LKKGL 189
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDL-RGKF 494
K +++ + +K K H RI +LE EK+DLE R++ ++ +LN + + R K
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 288
Query: 495 VKPTL 509
+K L
Sbjct: 289 LKKGL 293
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQ 470
+K K+ H+RI +LE +K+DLE R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQ 470
+K K+ H+RI +LE +K+DLE R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 33.9 bits (74), Expect = 0.069
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 327 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDME 449
N + + +K K+ H+RI +LE EK+DLE R++ +
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYD 249
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNS-QVNDLRGKFVKPTL 509
+K + H RI +LE EK+DLE R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGL 284
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 354 IKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNS-QVNDLRGKFVKPTL 509
+K + H RI +LE EK+DLE R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGL 284
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPT 506
DDA D + + E+ +L+ E ++ K+ E DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPT 506
DDA D + + E+ +L+ E ++ K+ E DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPT 506
DDA D + + E+ +L+ E ++ K+ E DL + ++DLRG F K T
Sbjct: 446 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVNDLRGKFVKPT 506
DDA D + + E+ +L+ E ++ K+ E DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 345 EDTIKRVCKDYHERIARLEDEKFDLEY 425
ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697
>AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical
protein C18B12.5 protein.
Length = 277
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 324 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIXXRKDMEIXDLNSQVND-LRGKFVK 500
KN N D K + D+H+ +++ + + LEYI +I + S+ N + GKF
Sbjct: 171 KNASILNLDC-KYLPADFHQHLSKFKHLEIKLEYISNEDIDKIKKMISEPNSIMNGKFKS 229
Query: 501 PT 506
T
Sbjct: 230 ST 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,997,856
Number of Sequences: 27780
Number of extensions: 111472
Number of successful extensions: 409
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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