Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31679
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 355  QKPHRPSHRAPYRT 314
            QKP +PS+R P  T
Sbjct: 1167 QKPTKPSYRPPSTT 1180


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 364 NFTQLLTXFANRMSGGSDEXDVVINAFKTFXEEGKIDSE 480
           +FTQ L+ +     G   E   +IN      +E K+D +
Sbjct: 81  DFTQHLSQYDTCQQGIYPENKTLINETSLQLDENKLDKK 119


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 364 NFTQLLTXFANRMSGGSDEXDVVINAFKTFXEEGKIDSE 480
           +FTQ L+ +     G   E   +IN      +E K+D +
Sbjct: 81  DFTQHLSQYDTCQQGIYPENKTLINETSLQLDENKLDKK 119


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 364 NFTQLLTXFANRMSGGSDEXDVVINAFKTFXEEGKIDSE 480
           +FTQ L+ +     G   E   +IN      +E K+D +
Sbjct: 81  DFTQHLSQYDTCQQGIYPENKTLINETSLQLDENKLDKK 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,533
Number of Sequences: 336
Number of extensions: 1065
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)