Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31679
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    25   1.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.1  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.1  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +1

Query: 226 EAFXLMDHDKDGIIGKNDLRATFDSLGXLAXDKELDEMVGEASGP 360
           E   L D ++DG +   +L  +  +LG    D ELD ++ +   P
Sbjct: 89  ECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDP 133


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 241 MDHDKDGIIGKND 279
           MDHDKD +   ND
Sbjct: 757 MDHDKDNLDSDND 769


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 408 AGHAVGEXSQELSEVDGARSLTDHLIELL 322
           AGH +    QEL E+    SL+  L++ L
Sbjct: 362 AGHPLSGIKQELPELPVRHSLSSELMQPL 390


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 174 RIQCLLYVLTXAGRRXQGGIPXNGSRQGWHHRQERLARHLRLP 302
           R Q LL  +    R+ Q     +  RQ W  +Q++  R  RLP
Sbjct: 166 REQELLRRMESQQRQEQRQQLEDQQRQRWRQQQQKQQRQQRLP 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.132    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,845
Number of Sequences: 2352
Number of extensions: 5177
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)