Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31679
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   10.0 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   10.0 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   10.0 

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 65 TXLSLSAILLCVGRSTKKRL 6
          T + +SAI +CVG  T + L
Sbjct: 3  TIVIISAICVCVGALTLEEL 22


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 429 DVXFVRAAGHAVGE 388
           D+ +VRA G AVG+
Sbjct: 34  DIIWVRADGSAVGD 47


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 447 LEGVDNDVXFVRAAGHAVGEXSQELS 370
           LE V   V F+R  GH +    +E+S
Sbjct: 305 LELVQLGVGFMRIFGHHLNRLGREIS 330


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.132    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,253
Number of Sequences: 438
Number of extensions: 1104
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)