Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31678
(357 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 64 2e-11
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 64 2e-11
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 51 2e-07
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 51 2e-07
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 36 0.008
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 34 0.034
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.034
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 34 0.034
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 34 0.034
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 33 0.044
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 33 0.059
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 33 0.059
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 31 0.24
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 29 0.72
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 29 0.95
Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical p... 28 2.2
Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical pr... 28 2.2
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 27 2.9
AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical... 27 3.9
AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical ... 27 3.9
Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z38112-5|CAD36484.1| 134|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z35603-4|CAD36496.1| 134|Caenorhabditis elegans Hypothetical pr... 27 5.1
AF166171-1|AAD49860.1| 611|Caenorhabditis elegans adducin-head-... 27 5.1
AF101319-3|AAC69355.1| 331|Caenorhabditis elegans Hypothetical ... 26 6.7
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 26 8.9
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 26 8.9
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 64.5 bits (150), Expect = 2e-11
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 77 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXXX--PIYSQ 250
F++YD E GKID +GD+ RA PT A + P+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 251 AKKDKDXGAYEDFLECLKLXDKNENGLMLGAELTH 355
K+K+ G Y DF E LK+ DK E G +L AEL H
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRH 107
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 64.5 bits (150), Expect = 2e-11
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 77 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXXX--PIYSQ 250
F++YD E GKID +GD+ RA PT A + P+Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 251 AKKDKDXGAYEDFLECLKLXDKNENGLMLGAELTH 355
K+K+ G Y DF E LK+ DK E G +L AEL H
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRH 107
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 51.6 bits (118), Expect = 2e-07
Identities = 31/102 (30%), Positives = 47/102 (46%)
Frame = +2
Query: 50 NDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX 229
+D+ F+ +D +G +I +GD+LRAL NPT A I
Sbjct: 2 DDLADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEI-HKCVGSFDREARLSFED 60
Query: 230 XXPIYSQAKKDKDXGAYEDFLECLKLXDKNENGLMLGAELTH 355
PI+ K+++ E+F+E L DK NG++ AEL H
Sbjct: 61 FVPIFQSVSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRH 102
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 51.2 bits (117), Expect = 2e-07
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 209 XXXXXXXXXPIYSQAKKDKDXGAYEDFLECLKLXDKNENGLMLGAELTH 355
+ A+K KD + E+ E ++ DK+ NG + AEL H
Sbjct: 61 NGTIDFPEF-LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 108
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 51.2 bits (117), Expect = 2e-07
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +2
Query: 32 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 208
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 209 XXXXXXXXXPIYSQAKKDKDXGAYEDFLECLKLXDKNENGLMLGAELTH 355
+ A+K KD + E+ E ++ DK+ NG + AEL H
Sbjct: 61 NGTIDFPEF-LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 108
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 45.6 bits (103), Expect = 1e-05
Identities = 27/100 (27%), Positives = 47/100 (47%)
Frame = +2
Query: 50 NDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX 229
+++E F ++D +G GKIDA + ++LR+L+ NP + +
Sbjct: 5 DNMEECREVFMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDV-HQCLAKFDKTARISFEN 63
Query: 230 XXPIYSQAKKDKDXGAYEDFLECLKLXDKNENGLMLGAEL 349
P+ S + +K + EDF++ L DK G + AEL
Sbjct: 64 FLPVLSHVRNNKIPYSMEDFIKGLSHFDKEGEGFITSAEL 103
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 32 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 163
+S L++ ++ AF ++D +G G I LG +RAL NPT
Sbjct: 20 ISQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPT 63
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 33.9 bits (74), Expect = 0.034
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 41 LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 163
L++ ++ AF ++D +G G I + LG +R+L NPT
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPT 69
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 33.9 bits (74), Expect = 0.034
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 74 AFSIYDFEGKGKIDAFNLGDLLRALNSN 157
AF +YD EG G I+ +L D+LRAL+ N
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDN 127
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 33.9 bits (74), Expect = 0.034
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 41 LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 163
L++ ++ AF ++D +G G I + LG +R+L NPT
Sbjct: 29 LNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPT 69
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 33.9 bits (74), Expect = 0.034
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 74 AFSIYDFEGKGKIDAFNLGDLLRALNSN 157
AF +YD EG G I+ +L D+LRAL+ N
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDN 127
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 33.5 bits (73), Expect = 0.044
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 77 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 175
F++YD E GKID +GD+ RA PT A +
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMV 45
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 32 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 163
+ L+ +++ AF ++D +G G I LG +R+L NPT
Sbjct: 72 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPT 115
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 33.1 bits (72), Expect = 0.059
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 32 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 163
+ L+ +++ AF ++D +G G I LG +R+L NPT
Sbjct: 15 IKQLTPEEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPT 58
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.24
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 29 KMSDLSKNDVERASFAFSIYDFEGKGKID 115
+M + N RA FAF + D EGKG++D
Sbjct: 178 EMGNYHINSSARAQFAFQLMDEEGKGRVD 206
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 29.9 bits (64), Expect = 0.55
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +2
Query: 11 NRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 163
N+ + + +++ + AF ++D +G ++ LG+ +R L NPT
Sbjct: 7 NQSVCSDADEFTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPT 57
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 29.5 bits (63), Expect = 0.72
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 77 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 175
F +D G GKID+ L LRA+ NPT A +
Sbjct: 14 FHFHDTLGDGKIDSKQLPTALRAMMLNPTEALL 46
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 251 AKKDKDXGAYEDFLECLKLXDKNENGLMLGAELTH 355
A+K K + E+ E ++ DK+ NG + AEL H
Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRH 57
>Z47812-10|CAH04720.1| 979|Caenorhabditis elegans Hypothetical
protein T05H10.5c protein.
Length = 979
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 23 PHKMSDLSKNDVERASFAFSIYDFEGK 103
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>Z47812-5|CAA87792.1| 980|Caenorhabditis elegans Hypothetical
protein T05H10.5a protein.
Length = 980
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 23 PHKMSDLSKNDVERASFAFSIYDFEGK 103
P +SD S DVE F S++D EGK
Sbjct: 11 PMDISDASVADVESKDFLTSLFDCEGK 37
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 48 RTTLKGRLSPSQS-TTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRXXARSCSHS 224
+T ++ + SP+ K + P+ L +R TP PSRNS +Q+ A
Sbjct: 302 KTEVRTKSSPTNPIVNSKQPSQKKPADLTPHPKRPPITPETLPSRNSEIQKPAASKIQEK 361
Query: 225 KS 230
K+
Sbjct: 362 KT 363
>AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical
protein Y43F8C.13 protein.
Length = 338
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 89 DFEGKGKIDAFNLGDLLRALNSNPTLATI 175
DFEG+GK + L D+LR N + TL TI
Sbjct: 106 DFEGEGKHASLALIDILRE-NRDATLVTI 133
>AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical
protein F52H2.7 protein.
Length = 875
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -3
Query: 163 CGV*VERSQEIAKVEGIDLTFAFKVVD 83
C + +ER + +AK E +D TF+FKV D
Sbjct: 101 CNIFMERMR-MAKTEVLDETFSFKVYD 126
>Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical
protein F57F5.4a protein.
Length = 611
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 102 KVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQR 197
KV + IS +PH QPS+ SVV R
Sbjct: 274 KVEQFEESAEISINNRALSPHIQPSKTSVVNR 305
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 26 HKMSDLSKNDVERASFAFSIYDFEGKGKID-AFNLGDLLRALNSN 157
H M+ +S + A ++YDF G G+ + GD +R L N
Sbjct: 89 HDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYN 133
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 26 HKMSDLSKNDVERASFAFSIYDFEGKGKID-AFNLGDLLRALNSN 157
H M+ +S + A ++YDF G G+ + GD +R L N
Sbjct: 94 HDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYN 138
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 26 HKMSDLSKNDVERASFAFSIYDFEGKGKID-AFNLGDLLRALNSN 157
H M+ +S + A ++YDF G G+ + GD +R L N
Sbjct: 104 HDMNTVSSSSSSSAPLFVALYDFHGVGEEQLSLRKGDQVRILGYN 148
>Z38112-5|CAD36484.1| 134|Caenorhabditis elegans Hypothetical
protein T02C12.4 protein.
Length = 134
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 26 HKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNL 127
HK++++ K ++ A FA++ + E G + A NL
Sbjct: 100 HKLAEIKKLTLKNAPFAYTNTEVEQNGFVKASNL 133
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 26 HKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNL 127
HK++++ K ++ A FA++ + E G + A NL
Sbjct: 775 HKLAEIKKLTLKNAPFAYTNTEVEQNGFVKASNL 808
>Z35603-4|CAD36496.1| 134|Caenorhabditis elegans Hypothetical
protein T02C12.4 protein.
Length = 134
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 26 HKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNL 127
HK++++ K ++ A FA++ + E G + A NL
Sbjct: 100 HKLAEIKKLTLKNAPFAYTNTEVEQNGFVKASNL 133
>AF166171-1|AAD49860.1| 611|Caenorhabditis elegans
adducin-head-domain-related protein protein.
Length = 611
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 102 KVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQR 197
KV + IS +PH QPS+ SVV R
Sbjct: 274 KVEQFEESAEISINNRALSPHIQPSKTSVVNR 305
>AF101319-3|AAC69355.1| 331|Caenorhabditis elegans Hypothetical
protein K08D9.5 protein.
Length = 331
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 35 SDLSKND-VERASFAFSIYDFEGKGKIDAFNLGDLLRALNSN 157
++ KN+ V+ S+ ++ F G + FN DL+ L S+
Sbjct: 123 AEFDKNEGVKSISYGRKVHQFVRAGSLSEFNFHDLMSTLKSS 164
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 48 RTTLKGRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRXXARSC 215
RTT + L+PS++ +L PST++ + R TP PS ++ V R + SC
Sbjct: 2075 RTTSRPMLTPSKNFSLGTPPTPSPSTVSTTPFR-IYTPGSAPS-DARVSRPTSNSC 2128
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 154 KPHTGNHRETRWYKEXXREAAH 219
+ H G HRE R +KE R+ H
Sbjct: 297 RDHRGEHREHREHKEHRRDDRH 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,780,076
Number of Sequences: 27780
Number of extensions: 102130
Number of successful extensions: 299
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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