Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31673
         (412 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HR71 Cluster: Uncharacterized polypeptide; n=2; Culic...    54   1e-06
UniRef50_UPI0000DB6C6F Cluster: PREDICTED: hypothetical protein;...    40   0.020
UniRef50_UPI00015B4594 Cluster: PREDICTED: hypothetical protein;...    36   0.24 

>UniRef50_Q1HR71 Cluster: Uncharacterized polypeptide; n=2;
           Culicidae|Rep: Uncharacterized polypeptide - Aedes
           aegypti (Yellowfever mosquito)
          Length = 63

 Score = 53.6 bits (123), Expect = 1e-06
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
 Frame = +2

Query: 14  MKTTQVAQYALRLTYSQ-------QANREKMMTRSALLLATIGLGLSTFSVRQMILNQ 166
           MKTTQ+A+YA+RL Y Q         + ++   RSA LLA +G+GLS+FS++QM+  Q
Sbjct: 1   MKTTQIARYAIRLNYGQVNEFAAGSKSSDRTTVRSAALLAALGIGLSSFSMKQMLTKQ 58


>UniRef50_UPI0000DB6C6F Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 151

 Score = 39.9 bits (89), Expect = 0.020
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 8/59 (13%)
 Frame = +2

Query: 14  MKTTQVAQYALRLTYSQ-------QANR-EKMMTRSALLLATIGLGLSTFSVRQMILNQ 166
           M  T    YALRL+  Q       + N  E+ MT+SA +LAT+GL +S FSVR+M+ ++
Sbjct: 88  MYLTPATLYALRLSLQQGTVSSVFRRNMVERNMTKSAYILATVGLSMSIFSVRKMLTSK 146


>UniRef50_UPI00015B4594 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 70

 Score = 36.3 bits (80), Expect = 0.24
 Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
 Frame = +2

Query: 14  MKTTQVAQYALRLTYSQQA---------NREKMMTRSALLLATIGLGLSTFSVRQM 154
           M  T+ AQYALRL+ +Q A         N     T SA++LAT GL +S FS+ QM
Sbjct: 1   MYLTRTAQYALRLSLTQPAGPAAPVFRRNSVDRGTASAVVLATAGLSMSMFSLVQM 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,802,938
Number of Sequences: 1657284
Number of extensions: 6320022
Number of successful extensions: 13742
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13728
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)