Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31673
(412 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640727-1|CAE45843.1| 620|Homo sapiens hypothetical protein pr... 29 4.5
BX538173-1|CAD98048.1| 620|Homo sapiens hypothetical protein pr... 29 4.5
BC041384-1|AAH41384.1| 620|Homo sapiens kelch-like 8 (Drosophil... 29 4.5
AB037799-1|BAA92616.2| 628|Homo sapiens KIAA1378 protein protein. 29 4.5
BC050718-1|AAH50718.1| 472|Homo sapiens POLK protein protein. 29 6.0
BC014955-1|AAH14955.1| 313|Homo sapiens POLK protein protein. 29 6.0
AY769932-1|AAV80830.1| 461|Homo sapiens polymerase kappa isofor... 29 6.0
AY769931-1|AAV80829.1| 371|Homo sapiens polymerase kappa isofor... 29 6.0
AY769930-1|AAV80828.1| 489|Homo sapiens polymerase kappa isofor... 29 6.0
AY769929-1|AAV80827.1| 780|Homo sapiens polymerase kappa isofor... 29 6.0
AY273797-1|AAP12648.1| 870|Homo sapiens polymerase (DNA directe... 29 6.0
AK091659-1|BAC03714.1| 372|Homo sapiens protein ( Homo sapiens ... 29 6.0
AF315602-1|AAN15780.1| 672|Homo sapiens DNA polymerase kappa pr... 29 6.0
AF194973-1|AAF23270.1| 870|Homo sapiens DINP protein protein. 29 6.0
AF163570-1|AAF02540.1| 870|Homo sapiens DINB protein protein. 29 6.0
AB209291-1|BAD92528.1| 790|Homo sapiens polymerase (DNA directe... 29 6.0
AB027564-1|BAA86943.1| 870|Homo sapiens DINB1 protein. 29 6.0
>BX640727-1|CAE45843.1| 620|Homo sapiens hypothetical protein
protein.
Length = 620
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 144 TLNVDRPRPMVARSRADRVIIFSRFACCEYVSLNAYWATCV 22
TL VD +P++ + +V + +R ACCEY+ L+ + + C+
Sbjct: 131 TLTVDNVQPLLYAACILQVELVAR-ACCEYMKLHFHPSNCL 170
>BX538173-1|CAD98048.1| 620|Homo sapiens hypothetical protein
protein.
Length = 620
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 144 TLNVDRPRPMVARSRADRVIIFSRFACCEYVSLNAYWATCV 22
TL VD +P++ + +V + +R ACCEY+ L+ + + C+
Sbjct: 131 TLTVDNVQPLLYAACILQVELVAR-ACCEYMKLHFHPSNCL 170
>BC041384-1|AAH41384.1| 620|Homo sapiens kelch-like 8 (Drosophila)
protein.
Length = 620
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 144 TLNVDRPRPMVARSRADRVIIFSRFACCEYVSLNAYWATCV 22
TL VD +P++ + +V + +R ACCEY+ L+ + + C+
Sbjct: 131 TLTVDNVQPLLYAACILQVELVAR-ACCEYMKLHFHPSNCL 170
>AB037799-1|BAA92616.2| 628|Homo sapiens KIAA1378 protein protein.
Length = 628
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -2
Query: 144 TLNVDRPRPMVARSRADRVIIFSRFACCEYVSLNAYWATCV 22
TL VD +P++ + +V + +R ACCEY+ L+ + + C+
Sbjct: 139 TLTVDNVQPLLYAACILQVELVAR-ACCEYMKLHFHPSNCL 178
>BC050718-1|AAH50718.1| 472|Homo sapiens POLK protein protein.
Length = 472
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>BC014955-1|AAH14955.1| 313|Homo sapiens POLK protein protein.
Length = 313
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>AY769932-1|AAV80830.1| 461|Homo sapiens polymerase kappa isoform 4
protein.
Length = 461
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>AY769931-1|AAV80829.1| 371|Homo sapiens polymerase kappa isoform 3
protein.
Length = 371
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 148 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 187
>AY769930-1|AAV80828.1| 489|Homo sapiens polymerase kappa isoform 2
protein.
Length = 489
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>AY769929-1|AAV80827.1| 780|Homo sapiens polymerase kappa isoform 1
protein.
Length = 780
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 148 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 187
>AY273797-1|AAP12648.1| 870|Homo sapiens polymerase (DNA directed)
kappa protein.
Length = 870
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>AK091659-1|BAC03714.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ34340 fis, clone FEBRA2009754, highly similar to
Homo sapiens DINB protein (DINB1) mRNA. ).
Length = 372
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 148 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 187
>AF315602-1|AAN15780.1| 672|Homo sapiens DNA polymerase kappa
protein.
Length = 672
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>AF194973-1|AAF23270.1| 870|Homo sapiens DINP protein protein.
Length = 870
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>AF163570-1|AAF02540.1| 870|Homo sapiens DINB protein protein.
Length = 870
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
>AB209291-1|BAD92528.1| 790|Homo sapiens polymerase (DNA directed)
kappa variant protein.
Length = 790
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 158 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 197
>AB027564-1|BAA86943.1| 870|Homo sapiens DINB1 protein.
Length = 870
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 94 VRSTPSHHRS-RPVHV*RTPDDPQPVLDAFRTNQYSQNNP 210
V H RS P+ +P D QP D F+ N QNNP
Sbjct: 238 VNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNP 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,909,286
Number of Sequences: 237096
Number of extensions: 1053340
Number of successful extensions: 2125
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2125
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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