Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31673
         (412 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec...    27   5.3  
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph...    27   5.3  
Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AC098856-6|AAR12981.1|   93|Caenorhabditis elegans Hypothetical ...    27   7.0  

>Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical
           protein W06G6.10 protein.
          Length = 101

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 299 CXTWMHSGVFFFQKTFCFCIVNCLRQACSG 210
           C + MH  + FF +  C C   C++  C G
Sbjct: 72  CCSCMHGVLRFFAELCCNCCAGCVQGICQG 101


>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like receptor
            TOL-1 protein.
          Length = 1221

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 168  HWLRIIWRTLNVDRPRPMVARSRADRVI 85
            H+L   W+TL +     + A++RA RVI
Sbjct: 1123 HFLENEWKTLQIKTSHQLFAKNRAKRVI 1150


>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosophila)
            family protein 1 protein.
          Length = 1221

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 168  HWLRIIWRTLNVDRPRPMVARSRADRVI 85
            H+L   W+TL +     + A++RA RVI
Sbjct: 1123 HFLENEWKTLQIKTSHQLFAKNRAKRVI 1150


>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 91  TVRSTPSHHRSRPVHV*RTPDDPQPVLDAFRTNQYSQNNPPEQ 219
           T+++ P H+ SR +   R  D  +   +   TNQ+  NN  +Q
Sbjct: 616 TLQNEPIHNTSRLLLTKRLEDSGERTTNNTNTNQHETNNSHQQ 658


>AC098856-6|AAR12981.1|   93|Caenorhabditis elegans Hypothetical
           protein Y37F4.7 protein.
          Length = 93

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 100 STPSHHRSRPVHV*RTPDDPQPVLDAFRTNQYSQNNPPEQA 222
           S P        H+    D P PV D   T  Y+++ PP+ A
Sbjct: 36  SAPRMRSPTETHIEMPRDTPSPVKDPEVTCSYNKDPPPDYA 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,615,783
Number of Sequences: 27780
Number of extensions: 162212
Number of successful extensions: 347
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)