Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31672
(315 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54616| Best HMM Match : zf-AD (HMM E-Value=0.038) 38 0.002
SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38) 38 0.002
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_40279| Best HMM Match : zf-MYM (HMM E-Value=0.66) 28 1.8
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 27 3.2
SB_20736| Best HMM Match : DUF1628 (HMM E-Value=9.4) 27 3.2
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_28966| Best HMM Match : Kinesin (HMM E-Value=0.012) 26 5.6
SB_42247| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_5940| Best HMM Match : Antimicrobial_3 (HMM E-Value=2.4) 26 7.4
SB_16427| Best HMM Match : Orn_Arg_deC_N (HMM E-Value=6.2e-29) 26 7.4
SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_37912| Best HMM Match : BTB (HMM E-Value=3.6e-13) 25 9.8
SB_28160| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 25 9.8
>SB_54616| Best HMM Match : zf-AD (HMM E-Value=0.038)
Length = 607
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 90 ESAPVXLHEXAPEVPXEIKAXDVIETASIPASESSPIVASETVLGITSEALSDVPLEIPV 269
E APV E A E +E A++PA E +P+ A E + +E VP+E+
Sbjct: 138 EQAPVPAVEQATVPAVEQAPVPAVEQATVPAVEQAPVPAVEQAT-VPAEGQVLVPVEVRA 196
Query: 270 PVAELEQ-VQPTEV 308
PV EQ + P EV
Sbjct: 197 PVPTEEQALVPAEV 210
Score = 31.1 bits (67), Expect = 0.20
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 60 AGETVPLXVXESAPVXLHEXAPEVPXEIKAXDVIETASIPASESSPIVASETVLGITSEA 239
A E + E APV E A E +E A++PA E +V E + +E
Sbjct: 144 AVEQATVPAVEQAPVPAVEQATVPAVEQAPVPAVEQATVPA-EGQVLVPVEVRAPVPTEE 202
Query: 240 LSDVPLEIPVPV 275
+ VP E+ PV
Sbjct: 203 QALVPAEVQAPV 214
>SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38)
Length = 1935
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 90 ESAPVXLHEXAPEVPXEIKAXDVIETASIPASESSPIVASETVLGITSEALSDVPLEIPV 269
E APV E A E +E A++PA E +P+ A E + +E VP+E+
Sbjct: 138 EQAPVPAVEQATVPAVEQAPVPAVEQATVPAVEQAPVPAVEQAT-VPAEGQVLVPVEVRA 196
Query: 270 PVAELEQ-VQPTEV 308
PV EQ + P EV
Sbjct: 197 PVPTEEQALVPAEV 210
Score = 31.1 bits (67), Expect = 0.20
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 60 AGETVPLXVXESAPVXLHEXAPEVPXEIKAXDVIETASIPASESSPIVASETVLGITSEA 239
A E + E APV E A E +E A++PA E +V E + +E
Sbjct: 144 AVEQATVPAVEQAPVPAVEQATVPAVEQAPVPAVEQATVPA-EGQVLVPVEVRAPVPTEE 202
Query: 240 LSDVPLEIPVPV 275
+ VP E+ PV
Sbjct: 203 QALVPAEVQAPV 214
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.7 bits (61), Expect = 1.0
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -3
Query: 292 TCSSSATGTGISRGTSDKASLVIPNTVSLATIGEDSLAGIEAVSITSXALISLGTS 125
T ++ TGT + TS +A++ VS+AT E ++ VSI + +S TS
Sbjct: 2652 TEAAMTTGTPAAMATSTEAAMATSTEVSIATSTEVNMERGTQVSIPTHTHVSRATS 2707
>SB_40279| Best HMM Match : zf-MYM (HMM E-Value=0.66)
Length = 364
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 123 PEVPXEIKAXDVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPT 302
P P + A E A++ A E++ A L E+ S+ E+ V + V+PT
Sbjct: 6 PAGPSQENAVGPEEGATVQAVETTHESAVVPALETAGESASEPAAELVVEFVPEQGVEPT 65
Query: 303 EVPT 314
+ PT
Sbjct: 66 QTPT 69
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 186 ESSPIVASETVLGITSEALSDVPLEIPVPVAE--LEQVQP-TEVPT 314
E P+V + + +A+ + PLE P+ E +E+V+P TE PT
Sbjct: 5586 EEKPLVKEKELAVSAEKAVEEKPLEKPITRKEKKVEEVKPKTEKPT 5631
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 186 ESSPIVASETVLGITSEALSDVPLEIPVPVAE--LEQVQP-TEVPT 314
E P+V + + +A+ + PLE P+ E +E+V+P TE PT
Sbjct: 6022 EEKPLVEEKELAVSAEKAVEEKPLEKPITRKEKKVEEVKPKTEKPT 6067
>SB_20736| Best HMM Match : DUF1628 (HMM E-Value=9.4)
Length = 169
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 147 AXDVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELE 287
A D + S+ E +++ G+ + DVP ++PVP EL+
Sbjct: 27 AWDTLAPVSVAELEVIIKKGTKSAAGLDGLSFDDVPDDVPVPETELQ 73
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/56 (17%), Positives = 30/56 (53%)
Frame = +3
Query: 138 EIKAXDVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTE 305
++ +++ +++P S S+P ++ + + + + + + VP+ + V+PTE
Sbjct: 6850 DLSLPSIVKFSTVPGSASTPGDYTQVTDKVLNFDVEETRIVVSVPIVDDALVEPTE 6905
>SB_28966| Best HMM Match : Kinesin (HMM E-Value=0.012)
Length = 89
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 286 SSSATGTGISRGTSDKASLVIPNTVSLATIGEDSLAGIE 170
+S ATGT + G++ SLV V ++T+ E+SL E
Sbjct: 13 ASGATGTRLKEGSNINKSLVTLGIV-ISTLAENSLNSYE 50
>SB_42247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 64 VRLYPXMWXNLHPXLY 111
VRL+P +W LHP ++
Sbjct: 1 VRLHPGIWGRLHPGIW 16
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 67 RLYPXMWXNLHPXLYMKXLL 126
RL+P +W LHP ++ + +L
Sbjct: 10 RLHPGIWGTLHPGIWGRLIL 29
>SB_5940| Best HMM Match : Antimicrobial_3 (HMM E-Value=2.4)
Length = 409
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -1
Query: 198 SVKIHLQV*KQFQLHLXL*FXLAPQEXLHVKXRVQIXPHXRVQSHRHXQLQF 43
+V +H+ V +H+ + + LHV V + H V H H + F
Sbjct: 65 TVSLHVHVTVSLHVHVTVSLHVHVTVSLHVHVTVSLHVHVTVSLHVHVTVSF 116
>SB_16427| Best HMM Match : Orn_Arg_deC_N (HMM E-Value=6.2e-29)
Length = 251
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -3
Query: 292 TCSSSATGTGISRGTSDKASLVIPNTVSLATIGEDSLAGIEAVSITSXALISL 134
T S G++ G + + + PN VSL I E + G++ ++I + +++ L
Sbjct: 69 TVSEQEVQLGLTAGVAPENIIFTPNGVSLEEIEEVAKLGVQ-INIDNLSILEL 120
>SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 108 LHEXAPEVPXEIKAXDVIETASIPASESSPIVASETV 218
LH P IK DV+ + P+ ES+P S V
Sbjct: 90 LHNKHATKPKPIKYWDVVAVSQAPSPESNPNSPSPVV 126
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 159 LHLXL*FXLAPQEXLHVKXRVQIXPHXRVQSHRHXQL 49
LHL L P LH+K V++ P ++ H H +L
Sbjct: 721 LHLKEHVELPPP--LHLKEHVELPPPLHLKEHEHMEL 755
>SB_37912| Best HMM Match : BTB (HMM E-Value=3.6e-13)
Length = 470
Score = 25.4 bits (53), Expect = 9.8
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 120 APEVPXEIK--AXDVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQV 293
+P+ P +I A D++ + S PA SPI + + EALS +P E +
Sbjct: 357 SPDAPPKITLPAEDMLSSISGPAI--SPIQSKYSTPAQADEALSTMPSEPRASPRMQRKY 414
Query: 294 QPTEVPT 314
PT P+
Sbjct: 415 SPTSGPS 421
>SB_28160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 159 IETASIPASESSPIVASE----TVLGITSEALSDVPLEIPVPVAELEQV 293
++ +S+P ++ S + + + G+ +DVP +P P +EL+ V
Sbjct: 265 MDPSSVPIAKESSLAEKKRRALSASGLRPPNNADVPAPVPTPASELKSV 313
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 268 TGISRGTSDKASLVIPNTVSLATIGEDSLAGIEAVS 161
T + + + +S + NTV +A + E ++AGI VS
Sbjct: 1414 TTLDQARVNISSALATNTVPVAAVNESAVAGITLVS 1449
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,033,946
Number of Sequences: 59808
Number of extensions: 108813
Number of successful extensions: 322
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 400488992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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