Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31672
         (315 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   6.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   6.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 207 SETVLGITSEALSDVPLEIPVPVAELEQ 290
           + ++ GIT +  S V  E P P  E E+
Sbjct: 476 ASSIGGITRDISSLVVQEQPTPTTESEE 503


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
 Frame = +3

Query: 108 LHEXAPEVPXEIKAXDVIETASIPASESSPIVASETVLGITSE----ALSDVPLEIPVPV 275
           L E +     E    ++      PA+ + P    E + G+T E     L     E+   +
Sbjct: 25  LQESSTGQSVEFSPMELNALVGTPAAPNMPAEEGEGMAGVTGEEPFDTLDTFLRELQADL 84

Query: 276 AELEQVQPTEVPT 314
           AE    QPT   T
Sbjct: 85  AEAS--QPTSTTT 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,978
Number of Sequences: 438
Number of extensions: 1181
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)