Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31671
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 36 0.004
SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex sub... 34 0.011
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.033
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 33 0.033
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 30 0.18
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 30 0.18
SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease Pac1|S... 30 0.18
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 30 0.24
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 0.31
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.31
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 29 0.41
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 29 0.55
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 28 0.72
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 28 0.72
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 28 0.95
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 28 0.95
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 28 0.95
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 1.3
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 27 1.7
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 27 1.7
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 27 2.2
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 26 2.9
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 26 2.9
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 2.9
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 26 2.9
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 26 2.9
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.8
SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation fac... 26 3.8
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.1
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 25 5.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 5.1
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 6.7
SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces pom... 25 6.7
SPCC306.04c |set1||histone lysine methyltransferase Set1|Schizos... 25 6.7
SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces ... 25 6.7
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 25 6.7
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 25 6.7
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 25 8.9
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 25 8.9
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 25 8.9
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 25 8.9
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 25 8.9
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 25 8.9
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.9 bits (79), Expect = 0.004
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 61 VPAPPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQK 240
V PP +RA S TVE + ++ +K+ ++ +K + R P+P EQ K +
Sbjct: 943 VTEPP--VRASSVTVEPARVTESMNKMNISEEAKKP-EAPSRPRTAPIPEPEEQKKAPVE 999
Query: 241 QHEKKPTAEAPQKSQPT 291
+ + + + +AP +QPT
Sbjct: 1000 KKDAEKSVQAPIPAQPT 1016
Score = 29.5 bits (63), Expect = 0.31
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Frame = +1
Query: 103 VETKEIPKTASKIEQTKPVQKE--------AKVEKREIKTEAPKPTE--QHKPTQKQHEK 252
VE K S+ E+ K QK+ +K RE + E K E +H+ T+++ E
Sbjct: 699 VELMTGKKVYSRTERKKDTQKQSHDHGHSHSKSHDREKEKEKKKDREHRKHRETEEEDEG 758
Query: 253 KPTAEA-PQKSQPTVQPP 303
P A P+ ++P + PP
Sbjct: 759 PPPQPARPESTRPALAPP 776
>SPBC16C6.08c |qcr6||ubiquinol-cytochrome-c reductase complex
subunit 8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 214
Score = 34.3 bits (75), Expect = 0.011
Identities = 24/85 (28%), Positives = 34/85 (40%)
Frame = +1
Query: 31 SPNKQDFIGAVPAPPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPK 210
SP D GA A L + V + K K +KE E+KTE P+
Sbjct: 49 SPKTTDSTGARDANLSL-KTQEPIVSADDAKGAQGKGADEKEEKKETIQPPEEVKTEPPQ 107
Query: 211 PTEQHKPTQKQHEKKPTAEAPQKSQ 285
P E+ K+ E+ P EA + +
Sbjct: 108 PEEKEGKEAKEPEEPPKEEAEEPQE 132
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 32.7 bits (71), Expect = 0.033
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +1
Query: 100 TVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQK 279
T E+ + + I + +P + +K E+ E P P E P + E+ E P
Sbjct: 67 TFESTQTYENLESISKNEPTSEASKPLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLP 126
Query: 280 SQPTVQPPKP 309
+P + P P
Sbjct: 127 DEPVPEEPLP 136
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 32.7 bits (71), Expect = 0.033
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = +1
Query: 40 KQDFIGAVPAPPQ--LLRAFSKTVETKEIPKTASKIEQTK-PVQKEAKVEKREIKTEAPK 210
K+ F+ PA P+ +L T K + + TK P + + KTE P
Sbjct: 103 KKSFVPPKPAIPKGKVLSLGGNTSAPKSTKPISISLGGTKAPTTTKPAAPAAQSKTETPA 162
Query: 211 PTEQHKPTQKQHEKKPTAEAPQKSQPTVQPPKPAA 315
P + T+K+ P E P KS P+A
Sbjct: 163 PKVTSESTKKETAAPPPQETPTKSADAELAKTPSA 197
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 30.3 bits (65), Expect = 0.18
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 76 QLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKK 255
++LRAF + +E + K+ +K+ K+E+ E+ +E K E + +K H++K
Sbjct: 105 KILRAFEQGHVDEEDEERCRKMASDASEEKDRKIEEGELTSEEEK--EPIQDLRKSHKRK 162
Query: 256 PT--AEAPQKSQPTVQPPKPAANI 321
+ P K + P+ I
Sbjct: 163 SVEKSSVPNKKHKAERKRSPSPKI 186
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 30.3 bits (65), Expect = 0.18
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 217 EQHKPTQKQHEKKPTAEAPQKSQPTVQPPKPAA 315
E ++P Q + P A PT +PPKP A
Sbjct: 516 EPYRPASTQPTENPPAMPDHNGSPTTEPPKPNA 548
>SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease
Pac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 30.3 bits (65), Expect = 0.18
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 269 LHKNLNQLYNRQNPPLTSNPKQHPNLKQNQPLNQ 370
+++ L ++RQN P+ P HP ++NQ N+
Sbjct: 86 VYEMLKSRHDRQNEPVIEEPSSHPKNQKNQENNE 119
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 29.9 bits (64), Expect = 0.24
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 106 ETKEIPKTAS-KIEQTKP----VQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEA 270
E K+ K++S I Q+ P K+ K E K EA K E K +KQH + A
Sbjct: 448 EDKKSTKSSSDNIAQSGPRSSYFPKKTVSPKPEAKKEASKVAESTKIPKKQHTSAYESRA 507
Query: 271 PQKSQP 288
PQ P
Sbjct: 508 PQSKVP 513
Score = 25.4 bits (53), Expect = 5.1
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 103 VETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKS 282
V+ K IPKT SK PV R ++ KP+ ++ + K A + S
Sbjct: 126 VKKKPIPKTKSKPTSHAPVSDNVSSTFRNATRKSKKPSASKDTSRGVRKSKAGAPSDPSS 185
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.5 bits (63), Expect = 0.31
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = +1
Query: 22 YTGS-PNKQDFIGAVPAPPQLLRAFSKTVETKEI--PKTASKIEQTKPVQKEAKVEKREI 192
Y+ S P+ + + P S+TV ++ + P T+ KPV E + E+
Sbjct: 318 YSSSRPSASASLASSPTRSAFRPKTSETVSSEVVSSPPTSPLHSPVKPVSNEQVEQVTEV 377
Query: 193 KTEAPKPTEQHKPTQKQHEKKPTAEAPQKSQPTVQ 297
+ P P+ Q +QK + P + PT +
Sbjct: 378 ELSIPVPSIQEAESQKPVLTGSSMRRPSVTSPTFE 412
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.5 bits (63), Expect = 0.31
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 85 RAFSKTVETKEIPKTASKIEQT--KPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKK 255
R S V+ ++PK K+++ KP++ KVE ++T+ +P E + T Q EKK
Sbjct: 111 RIKSPDVKDFKLPKDILKVKEKSEKPLETSQKVEIETVETKPGEP-EVKQETNLQKEKK 168
Score = 28.3 bits (60), Expect = 0.72
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +1
Query: 103 VETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKS 282
+ET E +++Q +QKE K K +++++ K + + + + P E PQ
Sbjct: 145 IETVETKPGEPEVKQETNLQKEKKESKVKLESKEEKISRNLRSSSR--SISPVTEQPQ-- 200
Query: 283 QPTVQPPKP 309
P +QP P
Sbjct: 201 SPKIQPVIP 209
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 29.1 bits (62), Expect = 0.41
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 139 IEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKSQPTV 294
+++ V+ + KVE+ + E E+ K +K+ KK Q + PTV
Sbjct: 20 LKENDVVEDDGKVEENDAAEEGASNGEKKKKKKKKSSKKKKTPQEQTNPPTV 71
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 28.7 bits (61), Expect = 0.55
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 103 VETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKS 282
V T+E+ K + E+T+ V+ E + +I+ + ++ K T+K E E K+
Sbjct: 209 VVTREVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEELNKT 268
Query: 283 QP 288
+P
Sbjct: 269 KP 270
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 28.3 bits (60), Expect = 0.72
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 103 VETKEIPKTASKIEQTKP----VQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEA 270
V+ E+ KT ++E+ P ++++ K K + P TEQ + +HE E
Sbjct: 54 VQPLEVAKTVCQVEEYLPKRTKIERDGKQTKEPYDEDIPDGTEQEGLSDDEHEIYAYFET 113
Query: 271 P 273
P
Sbjct: 114 P 114
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 28.3 bits (60), Expect = 0.72
Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 70 PPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHE 249
PP ++ A + + ++ + + +P+Q+ + P P +Q + +Q Q +
Sbjct: 120 PPNMVAATNAPQQHPQLQRMMPILSSNQPIQQLPL--PNQASPYIPVPLQQQQQSQPQQQ 177
Query: 250 -KKPTAEAPQKSQPTVQP 300
++ + PQ+ QP QP
Sbjct: 178 PQQQQHQQPQQPQPPQQP 195
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 0.95
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 97 KTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHK 228
K+VE+ E + + ++ K +KEAK EK+E K + K ++ K
Sbjct: 429 KSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKKK 472
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.9 bits (59), Expect = 0.95
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 76 QLLRAFSKTVE--TKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHE 249
+LLR + E TKE+ + K+ K EK ++ + TEQ K TQ++
Sbjct: 891 ELLRESQRLCEGRTKELLNSQQKLYDLKHSYSSVMTEKSKLSDQVNDLTEQAKITQRKLS 950
Query: 250 KKPTAEAPQK 279
+ A A K
Sbjct: 951 EVQIALADSK 960
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 27.9 bits (59), Expect = 0.95
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +1
Query: 67 APPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQH 246
A + L K V + I + S ++ + + + E +K +AP + KP++++
Sbjct: 464 AAAEALGVLMKLVGERAINQYLSPLDDIRKSKIRSFYETATVKAKAPTKKSKVKPSKQEE 523
Query: 247 EK---KPTAEAPQK----SQPTVQPPKPAAN 318
K A+A +K S P V P+ A N
Sbjct: 524 SKVVVPSNAKAVKKSVVPSSPVVPSPRKATN 554
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 1.3
Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 7/97 (7%)
Frame = +1
Query: 31 SPNKQDFIGAVPAPPQLLRAFSKTVETKEIP-------KTASKIEQTKPVQKEAKVEKRE 189
S N ++ PP ++ TK+IP T S T P+ ++A +E +
Sbjct: 1289 SSNVPAVSASISTPPAVVPTVQHPQPTKQIPTAAVKDPSTTSTSFNTAPIPQQAPLENQF 1348
Query: 190 IKTEAPKPTEQHKPTQKQHEKKPTAEAPQKSQPTVQP 300
K P PT + + P + P VQP
Sbjct: 1349 SKMSLEPPVRPAVPTSPK-PQIPDSSNVHAPPPPVQP 1384
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 124 KTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAP 273
+ S + + K K AKVE RE + +QHK E+ + +AP
Sbjct: 874 RLVSLLRRPKHKVKHAKVETRESPMKNKPTKKQHKRAFSMFERPTSQKAP 923
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 226 KPTQK-QHEKKPTAEAPQKSQPTVQPPKPA 312
+P K +H K T E+P K++PT + K A
Sbjct: 881 RPKHKVKHAKVETRESPMKNKPTKKQHKRA 910
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 151 KPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEK 252
K QKE K KRE K E KP ++ + + EK
Sbjct: 217 KEKQKELKKGKREKKDEEEKPKKKKQKKSSKKEK 250
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 136 KIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTA 264
K P +K+ VE E T + ++HK QK++E+K T+
Sbjct: 244 KSNSNTPTEKDTTVEDYEEIT-IMRMKQKHKQKQKENERKATS 285
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 94 SKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAP 273
++T E K ASK + K + AK +K+ K E P+ ++ K + KK T ++
Sbjct: 692 ARTWFQSEKDKQASKASEAKDKKSLAKRKKQMEKEEVPRAYKKTK-NDRLSNKKSTKKSK 750
Query: 274 QK 279
K
Sbjct: 751 SK 752
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 26.2 bits (55), Expect = 2.9
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 124 KTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKS 282
K+A + K +K K I ++ PK + QH P + T + KS
Sbjct: 36 KSALRSALEKKNRKSKSKPKVTITSDTPKVSSQHSPVSSAYTGDSTTDLDSKS 88
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 26.2 bits (55), Expect = 2.9
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 106 ETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKSQ 285
E E PK ++ +KP KE+ E++ K KPT ++ KK + QK +
Sbjct: 423 EKVETPKPEAQ-PVSKP--KESAEEQKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEE 479
Query: 286 PTVQPPK 306
QP +
Sbjct: 480 TVTQPKR 486
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 26.2 bits (55), Expect = 2.9
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 70 PPQLLRAFSKTVETKEIPKTASKIEQT---KPVQKEAKVEKREIKTEAPKPTEQHKPTQK 240
P + RA SK + K +K+ K +K A V++ E E KP+ +HK K
Sbjct: 60 PIRKRRASSKKNMSNSSSKKRAKVMGNGGLKNGKKTAVVKEEEDFNEIAKPSPKHKRVSK 119
Query: 241 QHEKKPTAEAPQKSQ 285
+ K A++ K +
Sbjct: 120 ANGSKNGAKSAVKKE 134
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +1
Query: 100 TVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQK 279
T + +++ + I Q +EAK +K + + EA K + + +KQ KP+ + +
Sbjct: 634 TAKLEDLMRVGGPIRQRYLDAEEAKRQKVQAEREAAKAATKSE-AEKQ---KPSGKFEEG 689
Query: 280 SQPTVQPPKPAANI 321
+ PP PA +
Sbjct: 690 TGGRAPPPPPAEEV 703
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 25.8 bits (54), Expect = 3.8
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 94 SKTVETKEIPKTASKIEQ-TKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEA 270
S ++E+ SK+++ + +E + T + KP+ K + K +KPT A
Sbjct: 365 SSSLESNTFASDFSKVDRDATQAALSSSLETPSVLTSSYKPSSSSKVSAKSVSRKPTG-A 423
Query: 271 PQKSQPTVQPPKPA 312
P + P + P P+
Sbjct: 424 P--AIPKLPPKHPS 435
>SPBC1709.15c |cft2||cleavage factor two Cft2/polyadenylation factor
CPSF-73 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 797
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 115 EIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQ 243
E+ +K+E +KP ++E K E+ E K + K + K +K+
Sbjct: 664 EVSHMLAKVEISKPSEEEDKKEEVE-KKDGDKERNEEKKEEKE 705
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 100 TVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQ 222
T+ET P T IEQ++ VQ+ + + KPT++
Sbjct: 369 TLETSSKPVTEQAIEQSEVVQEVEEGDTNMTTNTILKPTDE 409
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 106 ETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKSQ 285
E E+ K ++ KEA E + K + K ++HK ++++ E+ E+P+K +
Sbjct: 443 EDVEMDIVIEKKKKKSSKLKEADGESSK-KEKKEKKDKKHKKSKRKSEESEDGESPKKKK 501
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 5.1
Identities = 21/93 (22%), Positives = 26/93 (27%)
Frame = +1
Query: 34 PNKQDFIGAVPAPPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKP 213
P + VPAP +V +P + KP V PKP
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Query: 214 TEQHKPTQKQHEKKPTAEAPQKSQPTVQPPKPA 312
+ P P P P V PP A
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Score = 24.6 bits (51), Expect = 8.9
Identities = 23/96 (23%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Frame = +1
Query: 34 PNKQDFIGAVPAPPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTE-APK 210
P I VP P + E +PK + + P V P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 211 PTEQHKPTQKQHEKKPTAEAPQKSQPTVQPPKPAAN 318
PT + P P++EAP S P P P +N
Sbjct: 1232 PTAKAPPVPA-----PSSEAPSVSTPRSSVPSPHSN 1262
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.0 bits (52), Expect = 6.7
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 31 SPNKQDFIGAVPAPPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPK 210
SP + + I P + + + +E + A ++ K ++K AK EKR K E
Sbjct: 686 SPEELEEIARRNVDPMVSELSERAAQERERKEQA---KEAKRLKKLAKEEKRLKKKEEKA 742
Query: 211 PTEQHKPTQKQHEK 252
+ K QK+ K
Sbjct: 743 RKAEEKRLQKERAK 756
>SPAC22E12.05c |rer1||Rer1 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 184
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 126 FWYFFSFYCFRKSSQ*LRRSRNCPYKI 46
++ SF+CFR+ Q + + R P+ I
Sbjct: 150 YYLVLSFFCFRRQIQHMLKYRYVPFDI 176
>SPCC306.04c |set1||histone lysine methyltransferase
Set1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 920
Score = 25.0 bits (52), Expect = 6.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 248 RKNQRRRLHKNLNQLYN 298
R+++ R LH LNQ+YN
Sbjct: 473 RRHEARPLHYQLNQMYN 489
>SPBC1D7.04 |mlo3||RNA annealing factor Mlo3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 199
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 115 EIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKP 231
E+ ++ I +KP + + KR ++ PKPT+ KP
Sbjct: 4 ELDQSLDAIIASKP---KGGIRKRRARSNKPKPTKNAKP 39
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 25.0 bits (52), Expect = 6.7
Identities = 8/34 (23%), Positives = 16/34 (47%)
Frame = +1
Query: 184 REIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKSQ 285
+E P+P+ P K+P+ +P+K +
Sbjct: 321 KEPAKPVPQPSSNEPPAPSAENKQPSVSSPEKKE 354
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +1
Query: 208 KPTEQHKPTQKQHEKKPTAEAPQKSQPTVQPPK 306
K E KP + +P A + + QP+V P+
Sbjct: 319 KTKEPAKPVPQPSSNEPPAPSAENKQPSVSSPE 351
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.0 bits (52), Expect = 6.7
Identities = 22/81 (27%), Positives = 30/81 (37%)
Frame = +1
Query: 67 APPQLLRAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQH 246
APP+ A K E K A+K + + P +E+ KP QK+
Sbjct: 121 APPEGGSAGPKKDEVKTADADAAK-DLSTPQDSSKPIEE--------KPMPDLGAEQKES 171
Query: 247 EKKPTAEAPQKSQPTVQPPKP 309
T AP +P PKP
Sbjct: 172 APSSTKPAPDAKEPEFSSPKP 192
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +1
Query: 106 ETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAP 273
+T IP++ S I + P QK K + APK T + K+ +AP
Sbjct: 63 DTFIIPRSTSVIVRRVPAQKSGKGTAARYVSGAPKTTGARSDSVKRPVPMLQKKAP 118
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 317 TSNPKQHPNLKQNQPLN 367
+SN +QHP L+ PLN
Sbjct: 374 SSNEEQHPGLRSLDPLN 390
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 112 KEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKK 255
K I +++ + K +QK+ E+R + EA + + + Q++ EKK
Sbjct: 65 KRIYNGSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKK 112
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 85 RAFSKTVETKEIPKTASKIEQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTA 264
R FSK +E+ + + + + + +++AKV+KR E K + + T+ KK
Sbjct: 68 RKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKR---LEIEKKQKDREQTRNMLSKKTKR 124
Query: 265 EAP 273
P
Sbjct: 125 GQP 127
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 196 TEAPKPTEQHKPTQKQHEKKPTAEAPQKSQ 285
TEAPK PT++ +K E P S+
Sbjct: 439 TEAPKSQFSSSPTKESTTRKSEVEPPSPSK 468
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 24.6 bits (51), Expect = 8.9
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +1
Query: 118 IPKTASKI-EQTKPVQKEAKVEKREIKTEAPKPTEQHKPTQKQHEKKPTAEAPQKSQPTV 294
+ K A+ I E +KP E ++E E PKPT P E K+
Sbjct: 263 LDKVAAWIYEHSKP--SETVKSEQETAVEHPKPTATTSAPSASPTGVPVEEESHKATSDA 320
Query: 295 QPPKPA 312
PP A
Sbjct: 321 VPPAEA 326
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.302 0.122 0.336
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,430,854
Number of Sequences: 5004
Number of extensions: 23637
Number of successful extensions: 146
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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