Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31666
         (341 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF139520-1|AAD33830.1|  176|Caenorhabditis elegans warthog prote...    29   0.66 
AF000298-2|AAC48258.1|  176|Caenorhabditis elegans Warthog (hedg...    29   0.66 
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    29   0.87 
Z82084-6|CAJ85781.1|  156|Caenorhabditis elegans Hypothetical pr...    27   2.7  
AC025726-36|AAL27268.1|  487|Caenorhabditis elegans Hypothetical...    27   4.7  
AC025726-35|AAL27267.1|  489|Caenorhabditis elegans Hypothetical...    27   4.7  
U61949-4|AAB03150.2|  414|Caenorhabditis elegans Hypothetical pr...    26   8.1  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    26   8.1  
AC024853-3|ABP57809.1|  244|Caenorhabditis elegans Hypothetical ...    26   8.1  

>AF139520-1|AAD33830.1|  176|Caenorhabditis elegans warthog protein
           WRT-5 protein.
          Length = 176

 Score = 29.5 bits (63), Expect = 0.66
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 201 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 91
           PS H+ +YA C  ++ + +C  +  W    T+ S GS
Sbjct: 48  PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84


>AF000298-2|AAC48258.1|  176|Caenorhabditis elegans Warthog
           (hedgehog-like family)protein 5, isoform a protein.
          Length = 176

 Score = 29.5 bits (63), Expect = 0.66
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 201 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 91
           PS H+ +YA C  ++ + +C  +  W    T+ S GS
Sbjct: 48  PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 11   KTIKNEIDHRCSSRPCGYRHRCPPY-RGLP*DRSV*IRRQPRWSLQLQFRDFQRHR 175
            K +KN++ +R SSR  G  H+ P + R LP D     R+  R + Q +F+  +  R
Sbjct: 2529 KFLKNKVHNRRSSRAPGIHHQRPLHPRWLPTDHET-DRKDSRAASQFRFQHMRSKR 2583


>Z82084-6|CAJ85781.1|  156|Caenorhabditis elegans Hypothetical
           protein ZK1053.7 protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 243 VRGSYSYTNTDGXPETITYF 302
           ++ +YSY N DG P + TY+
Sbjct: 112 IKDTYSYDNVDGTPISCTYY 131


>AC025726-36|AAL27268.1|  487|Caenorhabditis elegans Hypothetical
           protein Y71G12B.1b protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 150 NFETSNGIVRSETGELKEALDDDNKPHVIVAVRGS 254
           NF + NG+    +G+    +  D K  +I AVRG+
Sbjct: 174 NFRSPNGVCWDPSGKYIATMSPDRKMDLIDAVRGA 208


>AC025726-35|AAL27267.1|  489|Caenorhabditis elegans Hypothetical
           protein Y71G12B.1a protein.
          Length = 489

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 150 NFETSNGIVRSETGELKEALDDDNKPHVIVAVRGS 254
           NF + NG+    +G+    +  D K  +I AVRG+
Sbjct: 176 NFRSPNGVCWDPSGKYIATMSPDRKMDLIDAVRGA 210


>U61949-4|AAB03150.2|  414|Caenorhabditis elegans Hypothetical
           protein F49E8.2 protein.
          Length = 414

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 90  DYPKIVRSEFDASPDGAYNYNFETSNGIVRSETGELKEALD 212
           DY      +   S +GA + + +T N +  SE G L+  +D
Sbjct: 372 DYDIFDNQDETDSEEGARSESIDTGNKVSESEPGSLQSVID 412


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +1

Query: 91  TTLRSFGLNSTPAPMELT----TTISRLPTASCVAKLVS 195
           TT  S    STPAP   T    TT+S   T  C+   VS
Sbjct: 842 TTSPSTTTGSTPAPQSSTVASTTTVSPYTTTECICTTVS 880


>AC024853-3|ABP57809.1|  244|Caenorhabditis elegans Hypothetical
           protein Y71F9AR.2 protein.
          Length = 244

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 121 TPAPMELTTTISRLPTASCVAKL 189
           TPAP+  T ++S+L T S + KL
Sbjct: 219 TPAPLHKTPSLSKLKTGSKLLKL 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,867,833
Number of Sequences: 27780
Number of extensions: 121805
Number of successful extensions: 387
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)