Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31661
         (403 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical...    31   0.31 
AF016665-5|ABP57825.1|  649|Caenorhabditis elegans Hypothetical ...    31   0.41 
AF026204-2|AAB71251.2|  247|Caenorhabditis elegans Hypothetical ...    28   2.9  
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ...    27   3.8  
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical pr...    26   8.8  

>AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical
           protein Y57A10A.19 protein.
          Length = 425

 Score = 31.1 bits (67), Expect = 0.31
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 304 QAQGXSCRRRKAPXSKEKGRRRKESARNXREET 402
           Q +  S  RRK+P  +++ RRR +S+ N R  T
Sbjct: 316 QQRSPSVERRKSPQRRDERRRRHDSSENERRST 348


>AF016665-5|ABP57825.1|  649|Caenorhabditis elegans Hypothetical
           protein C49D10.4 protein.
          Length = 649

 Score = 30.7 bits (66), Expect = 0.41
 Identities = 19/66 (28%), Positives = 27/66 (40%)
 Frame = -1

Query: 256 LFAPFVXVFLQLFIQVRPLLVLTLDEFWISLTLLFRSG*HRDFFFYFLLLRARIFLLVST 77
           LF  FV V L   +  +  L + +D  W S+ L      H D   YF +L     +   T
Sbjct: 75  LFIVFVGVILVFVLFPKTFLSMNMDSAWSSIFLYHNMAQHSDNNMYFKMLNQAEDIFTHT 134

Query: 76  CWLFIE 59
             L +E
Sbjct: 135 WSLCVE 140


>AF026204-2|AAB71251.2|  247|Caenorhabditis elegans Hypothetical
           protein C30E1.6 protein.
          Length = 247

 Score = 27.9 bits (59), Expect = 2.9
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 259 PLFAPFVXVFLQLFIQ-VRPLLVLTLDEFWISLTLLFRSG*HRDFFFYFLLLRARI 95
           PL +  V +FL + +  V P+L  T+  F IS ++   +      +F+F ++R  I
Sbjct: 94  PLKSKLVLIFLVMTLSFVMPILSFTIPNFSISFSIFLWAKLQVLIYFFFYIVRKAI 149


>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
           protein Y46G5A.6 protein.
          Length = 1002

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 304 QAQGXSCRRRKAPXSKEKGRRRKESARNXREET 402
           + +  S  RRK+P  +++ RRR +S  N R  +
Sbjct: 666 ERRSPSVERRKSPLRRDERRRRHDSLENERRSS 698


>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical
           protein T28B8.3a protein.
          Length = 1838

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 91  LLVSTCWLFIECRTGRSRSLSHSALVTW 8
           LL+  CW F+         + H+A+ TW
Sbjct: 180 LLIDICWRFLSVYGMTEEDMKHNAVNTW 207


>Z82262-5|CAE17771.1|  679|Caenorhabditis elegans Hypothetical
           protein C43F9.10 protein.
          Length = 679

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 16/62 (25%), Positives = 24/62 (38%)
 Frame = -1

Query: 244 FVXVFLQLFIQVRPLLVLTLDEFWISLTLLFRSG*HRDFFFYFLLLRARIFLLVSTCWLF 65
           FV   L  F+     + + +D  W S+ L      H D   YF +L     +   T  L 
Sbjct: 79  FVGCILVFFLFPNTFVSMNMDSAWNSIFLYHNMAEHSDNNMYFKMLNQAEDIFTHTWSLC 138

Query: 64  IE 59
           +E
Sbjct: 139 VE 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,150,983
Number of Sequences: 27780
Number of extensions: 101151
Number of successful extensions: 368
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)