Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31660
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 130 DGSCSNFDYPSRGTFHTPVIRLLPEAGCXDDETSPSG 240
           + +C   + P+R     P + +LP+  C +D T+  G
Sbjct: 148 ENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTTIPG 184


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 148 FDYPSRGTFHTPV 186
           F YPSR T +TPV
Sbjct: 106 FYYPSRQTLYTPV 118


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 139 CSNFDYPSRGTFHTPVIRLLPE 204
           C+   YP + TF+  V+R  PE
Sbjct: 314 CAFSLYPLKSTFYLNVVRPFPE 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,505
Number of Sequences: 336
Number of extensions: 2127
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)