Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31660
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0273 - 26851077-26851167,26851433-26851869,26852125-268522...    28   3.9  
01_01_1067 + 8403584-8404195,8404532-8404693,8404837-8405346,840...    27   8.9  

>05_06_0273 -
           26851077-26851167,26851433-26851869,26852125-26852271,
           26852352-26854415,26854792-26854908,26855007-26855093,
           26855350-26855439,26855523-26855609,26856736-26856810
          Length = 1064

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 352 DLGSIHDSVNWLTXTTNCCXAEGKSNYMCXPIDIXQDDPV 471
           D+ S+ D   W    T    +EG SNY+C   D     P+
Sbjct: 230 DIESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLIPKPL 269


>01_01_1067 +
           8403584-8404195,8404532-8404693,8404837-8405346,
           8405434-8405493,8405721-8406137,8406576-8407100
          Length = 761

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 157 PSRGTFHTPVIRLLPEAG 210
           PSRG  H P++RL P  G
Sbjct: 34  PSRGVLHAPLLRLWPLGG 51


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,674,448
Number of Sequences: 37544
Number of extensions: 246431
Number of successful extensions: 476
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)