Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31660
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical pr... 33 0.16
AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical ... 30 0.85
U41017-2|AAC48212.1| 97|Caenorhabditis elegans Hypothetical pr... 27 6.0
U29613-2|AAC47061.1| 111|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLL-PE--AGCXDDETSPSGAXLKSAREVRQRILQTG 291
R G C+N P G HTP+ R++ P+ G + + + L S R + I
Sbjct: 161 RSFSGICNNVARPEWGASHTPMARIVRPDYADGVSEPRAAAASKPLPSVRSLSLTIFTPR 220
Query: 292 KAXXLSYXQLLAIISTIIFADLGSI--HDSVNWLTXTTNCCXAEGKSNYMCXPIDIXQDD 465
++ + +I +D+ +I +VN T + C G ++ C IDI D
Sbjct: 221 GEVHSDVTTMMGLWMQLIASDMVNIVPFQAVNEGTSSALPCCKRGFNHSECDAIDIPAAD 280
Query: 466 PVHR 477
P +R
Sbjct: 281 PAYR 284
Score = 33.5 bits (73), Expect = 0.092
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLLP---EAGCXDDET-SPSGAXLKSAREVRQRILQT 288
R +G C+N +P P+ LLP + G T + SG L + R V + +
Sbjct: 848 RTFNGWCNNLKFPEYANSFAPLRHLLPPQYDDGFDAPRTRAKSGRPLPNPRRVSNLVCED 907
Query: 289 GKAXXLSYXQLLAIISTIIFADLGSIHDSVNWLTXTTNC--CXAEGKSNYMCXPIDIXQD 462
+ + ++ ++ +L + NC C + K + C PI + +D
Sbjct: 908 KDVSHVKFTHMVMQFGQLLDHELTHSPVARGPNDEILNCTKCDSPEKISVHCMPIRVEKD 967
Query: 463 DP 468
DP
Sbjct: 968 DP 969
>Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 40.7 bits (91), Expect = 6e-04
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLL-PE--AGCXDDETSPSGAXLKSAREVRQRILQTG 291
R G C+N P G HTP+ R++ P+ G + + + L S R + I
Sbjct: 161 RSFSGICNNVARPEWGASHTPMARIVRPDYADGVSEPRAAAASKPLPSVRSLSLTIFTPR 220
Query: 292 KAXXLSYXQLLAIISTIIFADLGSI--HDSVNWLTXTTNCCXAEGKSNYMCXPIDIXQDD 465
++ + +I +D+ +I +VN T + C G ++ C IDI D
Sbjct: 221 GEVHSDVTTMMGLWMQLIASDMVNIVPFQAVNEGTSSALPCCKRGFNHSECDAIDIPAAD 280
Query: 466 PVHR 477
P +R
Sbjct: 281 PAYR 284
Score = 33.5 bits (73), Expect = 0.092
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLLP---EAGCXDDET-SPSGAXLKSAREVRQRILQT 288
R +G C+N +P P+ LLP + G T + SG L + R V + +
Sbjct: 848 RTFNGWCNNLKFPEYANSFAPLRHLLPPQYDDGFDAPRTRAKSGRPLPNPRRVSNLVCED 907
Query: 289 GKAXXLSYXQLLAIISTIIFADLGSIHDSVNWLTXTTNC--CXAEGKSNYMCXPIDIXQD 462
+ + ++ ++ +L + NC C + K + C PI + +D
Sbjct: 908 KDVSHVKFTHMVMQFGQLLDHELTHSPVARGPNDEILNCTKCDSPEKISVHCMPIRVEKD 967
Query: 463 DP 468
DP
Sbjct: 968 DP 969
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical protein
C46A5.4 protein.
Length = 1432
Score = 33.1 bits (72), Expect = 0.12
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 8/124 (6%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLLPEA---GCXDDET-SPSGAXLKSAREVRQRILQT 288
R G C+N P G T + RLL A G T S G+ L SAR++ +
Sbjct: 790 RTYSGWCNNLKNPKFGNAFTQMRRLLDPAYDDGFDTPRTRSVLGSELPSARKISNIVHSD 849
Query: 289 GKAXXLSYXQLLAIISTIIFADLGSIHDSVNWLTXTT--NC--CXAEGKSNYMCXPIDIX 456
+ + +L I+ D+ +H ++ T NC C + + C PI I
Sbjct: 850 APKFHVKFTHMLMQFGQILDHDM--MHSPISRGPKNTILNCSSCDSAQTLSIHCFPIKIE 907
Query: 457 QDDP 468
+DP
Sbjct: 908 ANDP 911
>Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical
protein F49E12.1 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.16
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLLPEAGCXDDET--SPSGAXLKSAREVRQRILQTGK 294
R +DG+C+N P +G T RL+P A T S S + REV +L + +
Sbjct: 144 RSMDGTCNNLQNPVKGAAFTAFTRLMPAAYDDGFNTLVSASRRNRPNPREVSVFLLSSER 203
Query: 295 AXXLSYXQLLAIISTIIFADLGS 363
+ LL + + D+ S
Sbjct: 204 SLPGHVNSLLMLFGQFVSHDITS 226
>AL032621-2|CAA21491.2| 147|Caenorhabditis elegans Hypothetical
protein Y45F3A.4 protein.
Length = 147
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 130 DGSCSNFDYPSRGTFHTPVIRLLPEAGCXDDETSPSGAXLK 252
+GSC D+PS G +T R L + C + TS SG +K
Sbjct: 47 NGSCLMLDHPSMGIHYTCHTRGLKDGSC-HNRTSKSGVSVK 86
>U41017-2|AAC48212.1| 97|Caenorhabditis elegans Hypothetical
protein T26C11.3 protein.
Length = 97
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -3
Query: 241 LQMERFHRLHSRLRVTILSQGYGMFLLTDSRNYCMSH--QDVVCSLGSQGS*MSLVQFSK 68
+Q+E F R+HSR+ V S+ L + + Y H Q +G+ G+ + ++ S+
Sbjct: 12 VQLEAFQRIHSRIHVHPESRKSQQLLPGNGQCYNSLHPAQLFFRGIGAPGAALLIISTSQ 71
Query: 67 FSCSM 53
C++
Sbjct: 72 HQCTV 76
>U29613-2|AAC47061.1| 111|Caenorhabditis elegans Hypothetical
protein K02A6.2 protein.
Length = 111
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 82 PMTFNSPATPMSRRRLDGSCSNFDYP-SRGTFHTPVIRLLPEAGCXDDETSPSGAXLKSA 258
P F P + G+ +NF+ +R F TPV +LP D S G +A
Sbjct: 20 PTAFEGPKDDLE----SGNINNFETEHARNCFFTPVQCMLPMTDSHKDVQSLHGVYSPTA 75
Query: 259 REVRQRI 279
+VR+ +
Sbjct: 76 TQVRRSV 82
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLLP 201
R DG C+N ++P G +RLLP
Sbjct: 670 RSYDGQCNNHEHPWWGVSEMAFMRLLP 696
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 121 RRLDGSCSNFDYPSRGTFHTPVIRLLP 201
R DG C+N ++P G +RLLP
Sbjct: 670 RSYDGQCNNHEHPWWGVSEMAFMRLLP 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,791,861
Number of Sequences: 27780
Number of extensions: 212161
Number of successful extensions: 424
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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