Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31659
(303 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-08
SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-05
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-05
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 42 7e-05
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 42 7e-05
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 42 1e-04
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 42 1e-04
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 29 0.55
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 29 0.55
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 26 5.1
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 26 5.1
SB_58659| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.7
SB_24821| Best HMM Match : SAP (HMM E-Value=0.031) 26 6.7
SB_17924| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 54.0 bits (124), Expect = 2e-08
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1
Query: 160 CTXNTCXXGKTFLITGANSGXGLETGKALAKRKARVIFACTDIAK 294
C+ + GKT +ITGANSG G+E + LA RKARVI AC D+ K
Sbjct: 64 CSSDEKLKGKTVIITGANSGIGMEVARDLAWRKARVIMACRDVHK 108
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 52.4 bits (120), Expect = 7e-08
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +1
Query: 157 KCTXNTCXXGKTFLITGANSGXGLETGKALAKRKARVIFACTDIAKAKE 303
+CT GKT ++TGANSG G T LA+R ARVI AC D+ A++
Sbjct: 59 RCTNTVRLHGKTVIVTGANSGIGKATALELARRGARVIMACRDLESAEK 107
>SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 43.6 bits (98), Expect = 3e-05
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 184 GKTFLITGANSGXGLETGKALAKRKARVIFACTDIAKA 297
G+ ++TGA+SG GL T ALA A V+ AC D+ KA
Sbjct: 45 GRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKA 82
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 43.6 bits (98), Expect = 3e-05
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +1
Query: 184 GKTFLITGANSGXGLETGKALAKRKARVIFACTDIAKA 297
G+ ++TGA+SG GL T ALA A V+ AC D+ KA
Sbjct: 93 GRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKA 130
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 42.3 bits (95), Expect = 7e-05
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +1
Query: 160 CTXNTCXXGKTFLITGANSGXGLETGKALAKRKARVIFACTDI 288
CT GKT +ITGA +G G ET LAKR ARVI ++
Sbjct: 29 CTSEARLDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNL 71
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 42.3 bits (95), Expect = 7e-05
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +1
Query: 160 CTXNTCXXGKTFLITGANSGXGLETGKALAKRKARVIFACTDI 288
CT GKT +ITGA +G G ET LAKR ARVI ++
Sbjct: 29 CTSEARLDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNL 71
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 41.9 bits (94), Expect = 1e-04
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 187 KTFLITGANSGXGLETGKALAKRKARVIFACTDIAKAKE 303
++F+ITGANSG G ET +ALAK A V C D + ++
Sbjct: 44 RSFMITGANSGIGKETARALAKSGATVHMVCRDEQRGEQ 82
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 41.9 bits (94), Expect = 1e-04
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +1
Query: 187 KTFLITGANSGXGLETGKALAKRKARVIFACTDIAKAKE 303
++F+ITGANSG G ET +ALAK A V C D + ++
Sbjct: 44 RSFMITGANSGIGKETARALAKSGATVHMVCRDEQRGEQ 82
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 29.5 bits (63), Expect = 0.55
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 184 GKTFLITGANSGXGLETGKALAKRKARVI 270
G+T LITGA SG G T LAK+ +++
Sbjct: 35 GETVLITGAASGIGRLTALILAKKGCKLV 63
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 29.5 bits (63), Expect = 0.55
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 184 GKTFLITGANSGXGLETGKALAKRKARVIFA 276
G+ ++TGA+SG G KALA+ +V A
Sbjct: 104 GQVAIVTGASSGIGAAVAKALAEAGVKVALA 134
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 184 GKTFLITGANSGXGLETGKALAKRKARVIFA 276
GKT ITGA+ G G +A+ A V+ A
Sbjct: 5 GKTVFITGASRGIGKAIAVKVARDGANVVIA 35
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 187 KTFLITGANSGXGLETGKALAK 252
K +ITG +SG GL T LAK
Sbjct: 4 KVAVITGCSSGIGLATASILAK 25
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 184 GKTFLITGANSGXGLETGKALAKRKARV 267
G+ L+TG SG G +ALA R A V
Sbjct: 193 GRLALVTGGGSGIGRAVCEALANRGASV 220
>SB_58659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 191 VLPXXHVLXVHLPQFXDAQFT 129
V+P HVL H+PQF + T
Sbjct: 308 VIPYIHVLVYHVPQFLEIHGT 328
>SB_24821| Best HMM Match : SAP (HMM E-Value=0.031)
Length = 173
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 191 VLPXXHVLXVHLPQFXDAQFT 129
V+P HVL H+PQF + T
Sbjct: 117 VIPYIHVLVYHVPQFLEIHGT 137
>SB_17924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -2
Query: 293 FAMSVHAKITRAFLLAKALPVSSPXPLFAPVIRKVLPXXHVLXVHL 156
FA K+ R F LA + + + PLF +++++ +V +H+
Sbjct: 226 FAHPAPTKMERDFPLAFGIMIYNGLPLFERLLQEIYMPHNVYCIHI 271
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,830,567
Number of Sequences: 59808
Number of extensions: 110656
Number of successful extensions: 183
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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