Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31653
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06) 31 0.74
SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077) 30 0.98
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 28 4.0
SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024) 28 5.3
>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 565
Score = 31.9 bits (69), Expect = 0.32
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP+ A W HP+ A W+HP
Sbjct: 218 HPNKTQANWYHPNKTQANWNHP 239
Score = 31.1 bits (67), Expect = 0.56
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W+HP A W+HP
Sbjct: 178 HPTKTQANWNHPSKTRANWNHP 199
Score = 30.7 bits (66), Expect = 0.74
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W+HP A W+HP
Sbjct: 78 HPTKTHANWNHPSKTRANWNHP 99
Score = 30.7 bits (66), Expect = 0.74
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP+ A W+HP A W HP
Sbjct: 228 HPNKTQANWNHPTKTQANWYHP 249
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W+HP
Sbjct: 528 HPTKTQANWCHPTKTQANWNHP 549
Score = 29.1 bits (62), Expect = 2.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP + W+HP
Sbjct: 268 HPSKTQANWYHPSKTQSNWNHP 289
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 408 HPSKTHANWCHPTKTQANWCHP 429
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 418 HPTKTQANWCHPTKTQANWCHP 439
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 428 HPTKTQANWCHPTKTQANWCHP 449
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 403 SHPHTLPARWSHPHTLTAXWSHP 471
+HP A W HP A W HP
Sbjct: 237 NHPTKTQANWYHPTKTQANWYHP 259
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 258 HPTKTQANWYHPSKTQANWYHP 279
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP T A W +P A W HP
Sbjct: 308 HPTTTHANWCYPTKTQANWCHP 329
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 458 HPTKTQANWYHPSKTQANWYHP 479
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 468 HPSKTQANWYHPTKTQANWYHP 489
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 478 HPTKTQANWYHPSKTKANWYHP 499
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 518 HPTKTQANWYHPTKTQANWCHP 539
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 248 HPTKTQANWYHPTKTQANWYHP 269
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP T A W +P
Sbjct: 298 HPTKTHANWCHPTTTHANWCYP 319
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 508 HPTKTQANWYHPTKTQANWYHP 529
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 403 SHPHTLPARWSHPHTLTAXWSHP 471
+HP + + W HP+ A W +P
Sbjct: 47 NHPIKIQSNWCHPNKTQANWCYP 69
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP PA HP+ A W HP
Sbjct: 208 HPTKTPAYLCHPNKTQANWYHP 229
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP W HP
Sbjct: 338 HPTKTQANWYHPSKTQVNWYHP 359
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP + W HP
Sbjct: 488 HPSKTKANWYHPIKTQSNWYHP 509
>SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06)
Length = 425
Score = 30.7 bits (66), Expect = 0.74
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 452 VNVCGCDHLAGNVCGCDWHGNGRL 381
VN GC+ GN GC++ G+ R+
Sbjct: 381 VNTMGCEFQGGNTMGCEFQGDSRI 404
>SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)
Length = 677
Score = 30.3 bits (65), Expect = 0.98
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 403 SHPHTLPARWSHPHTLTAXWSHP 471
+HP A W HP+ A W HP
Sbjct: 282 NHPIKTQANWCHPNKTQANWCHP 304
Score = 30.3 bits (65), Expect = 0.98
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W+HP A W+HP
Sbjct: 423 HPTKTHANWNHPSKTWANWNHP 444
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W+HP A W HP
Sbjct: 383 HPTKTQANWNHPSKTQANWYHP 404
Score = 28.3 bits (60), Expect = 4.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSH 468
HP A W+HP A W+H
Sbjct: 313 HPTKTQANWNHPSKTQANWNH 333
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 473 HPAKTQANWYHPTKTQANWYHP 494
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP A W HP
Sbjct: 649 HPTKTQANWYHPTKTQANWYHP 670
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 403 SHPHTLPARWSHPHTLTAXWSHP 471
+HP A W HP + W HP
Sbjct: 392 NHPSKTQANWYHPPKTQSNWYHP 414
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP+ A W H + + W HP
Sbjct: 193 HPYKTQANWCHTSKIQSNWYHP 214
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP A W HP + W HP
Sbjct: 503 HPTKTQANWYHPSKTQSNWYHP 524
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = -2
Query: 443 CG-CD---HLAGNVCGCDWHGNGRL-HDGQGN 363
CG CD AG V CDW G+G L D +GN
Sbjct: 667 CGPCDVAVDSAGRVIACDWSGDGVLVFDSRGN 698
>SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024)
Length = 180
Score = 27.9 bits (59), Expect = 5.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1
Query: 403 SHPHTLPARWSHPHTLTAXWSHP 471
+HP + + W HP+ A W +P
Sbjct: 127 NHPIKIQSNWCHPNKTQANWCYP 149
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSH 468
HP A W+HP A W+H
Sbjct: 158 HPTKTHANWNHPSKTRANWNH 178
Score = 27.5 bits (58), Expect = 6.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
HP+ A W H + + W HP
Sbjct: 38 HPYKTQANWCHTSKIQSNWYHP 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,103,980
Number of Sequences: 59808
Number of extensions: 151813
Number of successful extensions: 486
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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