Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31653
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p pro...    28   6.5  
AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-P...    28   6.5  
AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-P...    28   6.5  
AE014134-2919|AAF53661.1|  446|Drosophila melanogaster CG15157-P...    28   6.5  
AE013599-1365|AAF58603.2| 1025|Drosophila melanogaster CG13188-P...    28   8.6  

>AY069429-1|AAL39574.1|  479|Drosophila melanogaster LD13887p
           protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +1

Query: 406 HPHTLP---ARWSHPHTLTAXWSHPXXP 480
           HPHT P   A+ SHPHTL     H   P
Sbjct: 337 HPHTHPHPHAQHSHPHTLPHSLPHHLQP 364


>AE014296-1669|AAF50260.2|  783|Drosophila melanogaster CG32043-PB,
           isoform B protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +1

Query: 406 HPHTLP---ARWSHPHTLTAXWSHPXXP 480
           HPHT P   A+ SHPHTL     H   P
Sbjct: 641 HPHTHPHPHAQHSHPHTLPHSLPHHLQP 668


>AE014296-1668|AAF50261.2|  783|Drosophila melanogaster CG32043-PA,
           isoform A protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = +1

Query: 406 HPHTLP---ARWSHPHTLTAXWSHPXXP 480
           HPHT P   A+ SHPHTL     H   P
Sbjct: 641 HPHTHPHPHAQHSHPHTLPHSLPHHLQP 668


>AE014134-2919|AAF53661.1|  446|Drosophila melanogaster CG15157-PA
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 406 HPHTLPARWSHPHTLTAXWSHP 471
           HPHTLP    HPH  T   SHP
Sbjct: 365 HPHTLP----HPHPHTHSHSHP 382


>AE013599-1365|AAF58603.2| 1025|Drosophila melanogaster CG13188-PA,
           isoform A protein.
          Length = 1025

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 359 HCSPARREAYHSRASHTHIRCQQGGHTHIR*QQXGPTQ 472
           H +P     +H    H H+RC++  H H++ Q   P Q
Sbjct: 554 HSNP-HAHPHHRLHRHVHVRCER--HAHLQQQHSAPLQ 588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,135,993
Number of Sequences: 53049
Number of extensions: 240502
Number of successful extensions: 820
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)