Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31649
         (369 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.2  
AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical...    27   4.2  
U58726-3|AAB00577.1|  357|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical ...    26   9.7  

>Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 204 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVXAHLD 353
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 204 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVXAHLD 353
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 204 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVXAHLD 353
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>U58726-3|AAB00577.1|  357|Caenorhabditis elegans Hypothetical
           protein T01C8.4 protein.
          Length = 357

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 255 LWSPESREALNNVTLLVAFRIQNARRDVXAHLD 353
           L SP+ RE   N   ++AFRI+  R+++   L+
Sbjct: 255 LKSPKYREQWQNSIKMMAFRIKKTRQELIRELN 287


>AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical
           protein Y48G10A.2 protein.
          Length = 375

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 242 KDMLTVEPRESGGSKQCDFTSRVSHSKRETR 334
           K ++  EP+E+   +  D+ + ++HSK E +
Sbjct: 326 KMLIRTEPKETALRRAADYLNELTHSKTEKK 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,291,430
Number of Sequences: 27780
Number of extensions: 127602
Number of successful extensions: 330
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)