Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31649
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   2.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    20   8.1  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 175 RTTGRSAECMNQMSETAVPLVLSS 104
           +  G+  +C N MSE  V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 200 GIIPRMVASHHRPLGRVHEPNVR 132
           G I  ++AS HR L      NVR
Sbjct: 219 GRISCVIASRHRNLEATESENVR 241


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 167 RPLGRVHEPNVRNCGSSRTEQYY 99
           R  G V E N++   +  TE+YY
Sbjct: 100 RHFGIVGECNIQYALNPNTEEYY 122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,374
Number of Sequences: 438
Number of extensions: 1508
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)