SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31639
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      334   3e-92
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              329   7e-91
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             326   5e-90
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              326   5e-90
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         325   2e-89
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             186   1e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)             157   5e-39
SB_54| Best HMM Match : Actin (HMM E-Value=0)                         107   7e-24
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             93   1e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  82   3e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     64   5e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  59   2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 56   1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               56   2e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   7e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  49   3e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  37   0.011
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.32 
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.56 
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)               30   0.98 
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)                    29   1.7  
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)            28   4.0  
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.0  
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)                     28   5.3  
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)                 28   5.3  
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)                28   5.3  
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)                     28   5.3  
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   6.9  
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    27   6.9  
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.2  
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)             27   9.2  
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.2  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  334 bits (820), Expect = 3e-92
 Identities = 154/157 (98%), Positives = 156/157 (99%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
           MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 405
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TQIMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           TQIMFET NSPAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  329 bits (809), Expect = 7e-91
 Identities = 151/157 (96%), Positives = 155/157 (98%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
           M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 405
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TQIMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           TQIMFET NSPAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  326 bits (802), Expect = 5e-90
 Identities = 151/157 (96%), Positives = 155/157 (98%)
 Frame = +1

Query: 46  MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
           M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 226 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 405
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 406 TQIMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           TQIMFET NSPAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 157


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  326 bits (802), Expect = 5e-90
 Identities = 151/155 (97%), Positives = 154/155 (99%)
 Frame = +1

Query: 52  DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
           +DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 232 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 411
           RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 412 IMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           IMFET NSPAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  325 bits (798), Expect = 2e-89
 Identities = 150/155 (96%), Positives = 154/155 (99%)
 Frame = +1

Query: 52  DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
           +D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 232 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 411
           RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 412 IMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           IMFET NSPAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 156


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  186 bits (452), Expect = 1e-47
 Identities = 84/89 (94%), Positives = 86/89 (96%)
 Frame = +1

Query: 52  DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
           DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 232 RGILTLKYPIEHGIITNWDDMEKIWHHTF 318
           RGILTLKYPIEHGI+TNWDDMEKI   TF
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIMFETF 90



 Score = 72.9 bits (171), Expect = 1e-13
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +1

Query: 391 NREKMTQIMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           N + M +IMFET NSPAMYVAIQAVLSLYASGRTTGIV+DSG
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSG 119


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score =  157 bits (381), Expect = 5e-39
 Identities = 74/154 (48%), Positives = 103/154 (66%), Gaps = 3/154 (1%)
 Frame = +1

Query: 64  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 237
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R 
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66

Query: 238 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 414
           +L + YP+++GI+ NWDDM+ +W +TF  +++ + P    VLLTE PLNP  NREKM ++
Sbjct: 67  MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126

Query: 415 MFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           MFE      +Y+AIQAVL+LYA G  TG+V+DSG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSG 160


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score =  107 bits (256), Expect = 7e-24
 Identities = 49/73 (67%), Positives = 59/73 (80%)
 Frame = +1

Query: 298  KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETXNSPAMYVAIQAVLSLY 477
            K+W H F ++LRV  E+ PVLLTEAPLNPK NRE+M Q+MFE+ N P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188

Query: 478  ASGRTTGIVLDSG 516
            ASGRTTG V D G
Sbjct: 2189 ASGRTTGTVFDCG 2201



 Score = 60.5 bits (140), Expect = 8e-10
 Identities = 28/53 (52%), Positives = 37/53 (69%)
 Frame = +1

Query: 13   ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 171
            AS T+    F+     V  +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 93.1 bits (221), Expect = 1e-19
 Identities = 39/57 (68%), Positives = 51/57 (89%)
 Frame = +1

Query: 346 EHPVLLTEAPLNPKANREKMTQIMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           +HPVLLTEAPLNP+ NREK  ++ FET N PA+++++QAVLSLYA+GRTTG+VLD+G
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAG 182


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 81.8 bits (193), Expect = 3e-16
 Identities = 35/87 (40%), Positives = 58/87 (66%)
 Frame = +1

Query: 256 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETXNS 435
           PI+ G+I +WD  EKI  + +   ++     HP+L++EA  N +  REK+T++MFE  N 
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62

Query: 436 PAMYVAIQAVLSLYASGRTTGIVLDSG 516
           PA ++   +VL+ +A+GR+ G+V+DSG
Sbjct: 63  PAFFLCKNSVLTAFANGRSNGLVIDSG 89


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 64.5 bits (150), Expect = 5e-11
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = +1

Query: 412 IMFETXNSPAMYVAIQAVLSLYASGRTTGIVLDSG 516
           IMFE  NSPA+YVAIQAVLSLYASGRTTG+V DSG
Sbjct: 1   IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSG 35


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = +1

Query: 70   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 171
            LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +1

Query: 7   IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 186
           IP +  + ++ FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741

Query: 187 --MGQKD-SYVGDEAQSKRGILTL 249
             +  KD    GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765



 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +1

Query: 457 QAVLSLYASGRTTGIVLDSG 516
           Q  LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 25/60 (41%), Positives = 34/60 (56%)
 Frame = +1

Query: 184 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 363
           G+   D ++GDEA  K    T K+PI H I+ +WD ME+ W    +  LR  PE+H  LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 50.8 bits (116), Expect = 7e-07
 Identities = 21/39 (53%), Positives = 31/39 (79%)
 Frame = -1

Query: 168 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 52
           +AR+  DG E+G+G +V+GETGLAH GAI+D +  +I+V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 61  VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 240
           +A LV+D G+   K GFA + APR++ P+ + + + +       ++  ++GD+ +  +  
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284

Query: 241 LTLKY--PIEHGIITNWDDMEKIWHHTFYNE 327
             L Y  P + G + NWD  ++IW +TF  E
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 36.7 bits (81), Expect = 0.011
 Identities = 19/68 (27%), Positives = 37/68 (54%)
 Frame = +1

Query: 301 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETXNSPAMYVAIQAVLSLYA 480
           I  H F + L+V P +H V++T         +E++ +I+       A+Y+  Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571

Query: 481 SGRTTGIV 504
               +GIV
Sbjct: 572 YSAVSGIV 579



 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 64  AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 168
           + +++D GS   KAGFA ++A +  + S++G   H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516


>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 175

 Score = 32.7 bits (71), Expect = 0.18
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 77  STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 223
           S   P+  R     TT+P P  +PSWV +     +  W     TW  RP
Sbjct: 36  SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80


>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 739

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 41  SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 145
           S C  T+L+R   T+ APA  +P+SPAT    P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 31.1 bits (67), Expect = 0.56
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +1

Query: 247 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 399
           L+ P +  ++T+++  E++  H F +     P    HPV++TE   NP   R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183


>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
          Length = 697

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 41  SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 145
           S C  T+L+R L +T APA   P SPAT    P  R
Sbjct: 21  SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56


>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
          Length = 682

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 32  TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 145
           T  S C  T+L+R   T+ APA   P SPAT    P  R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147


>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
          Length = 509

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 26  KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 151
           K T ++  ATT   +  +T  PA   P +P TT P  ++ P+
Sbjct: 63  KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104



 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 26  KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 151
           K T ++  ATT   +  +T  PA   P  P TT P  ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174


>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 494

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 41  SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 145
           S C  T+L+R   T+ APA   P SPAT    P  R
Sbjct: 72  SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 173 PWWRGRPTMDGKTARGASSPAKPALHMPEP 84
           P W  +    G T R    PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559


>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
          Length = 534

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +1

Query: 388 ANREKMTQIMFETXNSPAMYVAIQAVLSLYASGRTTGIV 504
           A +E++ +I+       A+Y+  Q++L++Y+    +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458


>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
          Length = 1851

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 41  SRCATTMLLR-L*STMAPACARPVSPAT 121
           S C  T+L+R L +T APA   P SPAT
Sbjct: 21  SSCLATLLVRPLETTPAPAPTTPTSPAT 48


>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
          Length = 1411

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 41  SRCATTMLLR-L*STMAPACARPVSPAT 121
           S C  T+L+R L +T APA   P SPAT
Sbjct: 21  SSCLATLLVRPLETTPAPAPTTPTSPAT 48


>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
          Length = 461

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 41  SRCATTMLLR-L*STMAPACARPVSPAT 121
           S C  T+L+R L +T APA   P SPAT
Sbjct: 14  SSCLATLLVRPLETTPAPAPTTPTSPAT 41


>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 886

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +1

Query: 298 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETXNSPAMYVAIQAVLSLY 477
           K+   T YN L V    +PV   +  +  + N  + TQ+M  T  +P  Y  +  V + Y
Sbjct: 81  KLMVFTRYNPLMVFTRYNPVRYAQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLM-VFTRY 139

Query: 478 ASGRTTGIVL 507
              R T +++
Sbjct: 140 NHVRYTQLMV 149


>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1077

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 43  KMCDDDVAALVVDNG-SGMCKAGFAGD 120
           ++CD D    + +N    MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 167 WRGRPTMDGKTARGASSPAKPALHMPEP 84
           W  +    G T R    PAKPAL++P P
Sbjct: 72  WLQQVKDGGNTNRRTRIPAKPALNLPSP 99


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 143 GKTARGASSPAKPALHMPEP 84
           G T R    PAKPAL++P P
Sbjct: 80  GNTNRRTRIPAKPALNLPSP 99


>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
          Length = 782

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 41  SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 145
           S C  T+++R   T+ APA   P SPAT    P  R
Sbjct: 51  SSCLATLVVRPLETIPAPAPTTPTSPATPASGPPIR 86


>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2541

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +2

Query: 41  SRCATTMLLR-L*STMAPACARPVSPAT 121
           S C  T L+R L +T APA   P SPAT
Sbjct: 523 SSCLATFLVRTLETTPAPAPTTPTSPAT 550


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.317    0.133    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,350,549
Number of Sequences: 59808
Number of extensions: 327254
Number of successful extensions: 1131
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -