Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31636
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    80   4e-17
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.66 
AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal ...    23   4.6  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    23   6.1  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   8.1  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   8.1  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 80.2 bits (189), Expect = 4e-17
 Identities = 37/49 (75%), Positives = 41/49 (83%)
 Frame = +3

Query: 6   MLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 152
           ML AELTH+L ALGE+LDD E+  V KDCMDPEDDDG IPYA FLKK+M
Sbjct: 102 MLLAELTHSLTALGERLDDVELDNVMKDCMDPEDDDGNIPYAPFLKKMM 150


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.66
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 45   GEKLDDSEVAEVTKDCMDPEDDDG 116
            G K+++  +AEV K  +D EDD G
Sbjct: 1250 GLKMENGVIAEVEKSQVDGEDDTG 1273


>AY187043-1|AAO39757.1|  171|Anopheles gambiae putative antennal
           carrier protein AP-1 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 15  AELTHTLLALGEKLDDSEVAEVTKDCMDP 101
           AE    ++      DD    +VT++C+DP
Sbjct: 64  AESFKCVIVKNSTKDDVNKVQVTRECLDP 92


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = +3

Query: 9   LGAELTH---TLLALGEKLDDSEVAEVTKDCM 95
           LG EL     T + LG+   DSE A+ T  CM
Sbjct: 35  LGGELPEDFATKMRLGDLTLDSETAKCTIQCM 66


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 310 LRAPPEELSPPRALPAPVPQ 251
           LRAPP     P+  P+  PQ
Sbjct: 277 LRAPPSSQQQPQQQPSQQPQ 296


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 322 SAGWLRAPPEELSPPRALPAP 260
           + G L+ PP   S P + P+P
Sbjct: 862 TGGMLKMPPSSNSSPSSYPSP 882


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,919
Number of Sequences: 2352
Number of extensions: 8111
Number of successful extensions: 68
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)