Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31636
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g27030.3 68415.m03247 calmodulin-2/3/5 (CAM5) (TCH1) identica... 43 1e-04
At3g56800.1 68416.m06317 calmodulin-2/3/5 (CAM3) identical to ca... 42 2e-04
At2g41110.1 68415.m05078 calmodulin-2/3/5 (CAM2) (CAL1) almost i... 42 2e-04
At2g27030.2 68415.m03246 calmodulin-2/3/5 (CAM5) (TCH1) identica... 42 2e-04
At2g27030.1 68415.m03245 calmodulin-2/3/5 (CAM5) (TCH1) identica... 42 2e-04
At5g21274.1 68418.m02533 calmodulin-6 (CAM6) identical to calmod... 42 3e-04
At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to calm... 41 4e-04
At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to... 41 4e-04
At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to calm... 41 4e-04
At4g14640.1 68417.m02252 calmodulin-8 (CAM8) identical to calmod... 38 0.003
At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 28 4.3
At4g39440.1 68417.m05581 expressed protein ; expression support... 28 4.3
At5g07080.1 68418.m00802 transferase family protein similar to 1... 27 5.7
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 27 5.7
At3g06530.1 68416.m00757 BAP28-related similar to Protein BAP28 ... 27 7.5
At5g07620.1 68418.m00873 protein kinase family protein contains ... 27 9.9
>At2g27030.3 68415.m03247 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 181
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA*KTSQLVIS 182
AEL H + LGEKL D EV E+ K+ D DG I Y F+K +MA + + V++
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIKEA--DVDGDGQINYEEFVKVMMAKRRGKRVMA 157
>At3g56800.1 68416.m06317 calmodulin-2/3/5 (CAM3) identical to
calmodulin GI:474183 from [Arabidopsis thaliana]; almost
identical to calmodulin-2/3/5 SP:P25069 [Arabidopsis
thaliana]
Length = 149
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ K+ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIKEA--DVDGDGQINYEEFVKVMMA 148
>At2g41110.1 68415.m05078 calmodulin-2/3/5 (CAM2) (CAL1) almost
identical to Calmodulin-2/3/5 SP:P25069 from
[Arabidopsis thaliana]
Length = 149
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ K+ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIKEA--DVDGDGQINYEEFVKVMMA 148
>At2g27030.2 68415.m03246 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 113
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ K+ D DG I Y F+K +MA
Sbjct: 68 AELRHVMTNLGEKLTDEEVDEMIKEA--DVDGDGQINYEEFVKVMMA 112
>At2g27030.1 68415.m03245 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 149
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ K+ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIKEA--DVDGDGQINYEEFVKVMMA 148
>At5g21274.1 68418.m02533 calmodulin-6 (CAM6) identical to
calmodulin-6 SP:Q03509 from [Arabidopsis thaliana];
contains Pfam profile: PF00036 EF hand
Length = 149
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLSDEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to
calmodulin 4 [Arabidopsis thaliana] GI:16223, SP|P25854
Calmodulin-1/4 {Arabidopsis thaliana}
Length = 149
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVEEMIREA--DVDGDGQINYEEFVKIMMA 148
>At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to
calmodulin GI:16227 from [Arabidopsis thaliana],
SP|P59220 Calmodulin-7 {Arabidopsis thaliana}
Length = 149
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQINYEEFVKVMMA 148
>At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to
calmodulin [Arabidopsis thaliana] GI:16223; nearly
identical to SP|P25854 Calmodulin-1/4 {Arabidopsis
thaliana}
Length = 149
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 155
AEL H + LGEKL D EV E+ ++ D DG I Y F+K +MA
Sbjct: 104 AELRHVMTNLGEKLTDEEVEEMIREA--DVDGDGQINYEEFVKIMMA 148
>At4g14640.1 68417.m02252 calmodulin-8 (CAM8) identical to
calmodulin 8 GI:5825600 from [Arabidopsis thaliana]
Length = 151
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 15 AELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 152
+EL+H ++ LGEKL D EV ++ K+ D DG + Y F+K ++
Sbjct: 105 SELSHVMINLGEKLTDEEVEQMIKEA--DLDGDGQVNYDEFVKMMI 148
>At5g56010.1 68418.m06989 heat shock protein, putative strong
similarity to SP|P55737 Heat shock protein 81-2
(HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00183: Hsp90 protein
Length = 699
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 27 HTLLALGEKLDDSEVAEVTKDCMDPEDDD 113
H +L LG +DD +V E D M P +DD
Sbjct: 660 HRMLKLGLSIDDDDVVEADAD-MPPLEDD 687
>At4g39440.1 68417.m05581 expressed protein ; expression supported
by MPSS
Length = 443
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 432 VQSKVESCTKQLILCCSYKKRGLSVSKM 349
V K E+CT L LC S KK G +V +
Sbjct: 153 VSFKEETCTPSLDLCLSIKKGGANVDTL 180
>At5g07080.1 68418.m00802 transferase family protein similar to
10-deacetylbaccatin III-10-O-acetyl transferase - Taxus
cuspidata, AF193765, EMBL:AF193765; contains Pfam
transferase family domain PF00248
Length = 450
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 147 PSSGMLRRGSCRHRLQGPCSP 85
P +G L RGS HRL+ CSP
Sbjct: 83 PLAGKLHRGSHDHRLELRCSP 103
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 301 PPEELSPPRALPAPVPQS 248
PP E PP +LP P P+S
Sbjct: 147 PPPESPPPESLPPPSPES 164
>At3g06530.1 68416.m00757 BAP28-related similar to Protein BAP28
(Swiss-Prot:Q9H583) [Homo sapiens]
Length = 1830
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 3 LMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA*KTSQLVIS 182
L+L + T G+ LDD ++ + DCM E + P L+K+ +L
Sbjct: 898 LLLECSMMRTSSFKGQSLDDHILSALNVDCMASERPAVISPCLTILEKLSNRFYDELQTD 957
Query: 183 LVIRSF 200
+ IR F
Sbjct: 958 VQIRFF 963
>At5g07620.1 68418.m00873 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 359
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 208 VAGKDLITKDMTSCDVFYAMTFFRNA 131
V+GK+ I ++ T D FY F RNA
Sbjct: 274 VSGKEPINENATGDDEFYLPDFMRNA 299
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,476,581
Number of Sequences: 28952
Number of extensions: 163380
Number of successful extensions: 518
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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