Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31635
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   3.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   9.9  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +2

Query: 74  YSFVFTFHIHM-INLKFGLMFYSS--VEYIL*LHLKALAVVNVLYLLISQVI 220
           ++ +++ H+ + I + F L+   S  V Y+   HL  +  V V+YLL + V+
Sbjct: 247 HNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVRYVMVVYLLKNVVL 298


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 73  YVQIIEWHTGIRN 35
           Y ++ +W+TG +N
Sbjct: 670 YAEVTDWYTGWKN 682


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 92  FHIHMINLKFGLMFYSSVEYIL 157
           F IH +     L + SSVEY++
Sbjct: 3   FKIHFLVFGALLTYVSSVEYLI 24


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 425 IVKICYNISKIVKVRKNLITRL*ILE 348
           +VK CY++ KI   +  +   L  LE
Sbjct: 113 VVKQCYHLQKINVQQSGIFINLPFLE 138


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -2

Query: 93  NVKTKLYMCKSSNGIQEYAIRSHS*NYXC 7
           N + ++ +C SS  +     + H+ +Y C
Sbjct: 57  NCQNRINLCDSSPCLNGATCQDHTTHYTC 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,148
Number of Sequences: 336
Number of extensions: 2018
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)