Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31625
         (508 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217...    29   2.1  
07_01_0130 - 963856-965454                                             28   3.7  
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260...    28   5.0  
07_03_1107 - 24024387-24024497,24025799-24026410                       27   8.7  
05_05_0213 + 23307403-23307573,23308691-23308810                       27   8.7  
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600...    27   8.7  
01_03_0267 + 14433080-14433122,14434560-14434914,14435017-14436136     27   8.7  

>02_04_0451 +
           23021139-23021269,23021366-23021498,23021594-23021789,
           23023376-23023737,23024049-23024363
          Length = 378

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = -3

Query: 212 LHQLRTAMHHHP--PNQERAVNLSILPVSGPGEISRVESN*AAGSTPGGALPSIPLSFSF 39
           LH L T     P  P +  +   +ILP   PG  S + S    G TP G +   P  F F
Sbjct: 313 LHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFF 372


>07_01_0130 - 963856-965454
          Length = 532

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 209 HQLRTAMHHHPPNQERAVNLSILPVSGPGEISR 111
           H +   +   PPN     NL +LP+ GP ++ +
Sbjct: 195 HIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGK 227


>02_01_0362 +
           2607097-2607371,2607766-2608612,2608842-2608910,
           2609968-2610202,2610454-2610536,2610924-2611046,
           2611326-2611379
          Length = 561

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 497 PQSPARRSFSGLPGPLGQGEHADSFSVARVRPRTS 393
           PQ P    F GLP  +G  +H D  ++A   P  S
Sbjct: 278 PQKPVENFFKGLPYAVGD-QHGDWIAIAHQHPLLS 311


>07_03_1107 - 24024387-24024497,24025799-24026410
          Length = 240

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 500 KPQSPARRSFSGLPGPLGQGEHADS 426
           K ++PA  S +  PGP G G  ADS
Sbjct: 179 KAKAPAASSTADAPGPAGDGVAADS 203


>05_05_0213 + 23307403-23307573,23308691-23308810
          Length = 96

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -1

Query: 394 LRASQTCYCSISCGSK--TPVPLRRILIRRQ*VARHEAAHT*IT-TPI 260
           LRAS  C CS++ GS+  TP P  +  +R     R EA +T  T TP+
Sbjct: 42  LRASVCCRCSVAAGSQNITPFPDLKFELR----TRQEAKNTLNTCTPL 85


>01_06_0090 +
           26358051-26359157,26359582-26359701,26359968-26360099,
           26360194-26360375,26360488-26360602,26362001-26362135,
           26362261-26362395
          Length = 641

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 497 PQSPARRSFSGLPGPLGQGEHADSFS 420
           P++P R S SG P P G    A SF+
Sbjct: 20  PETPGRGSSSGSPAPGGSASKAVSFA 45


>01_03_0267 + 14433080-14433122,14434560-14434914,14435017-14436136
          Length = 505

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 497 PQSPARRSFSGLPGPLGQGEHADSFSVARVRPRTSKG 387
           PQ     S+ GL  P+G+ + AD F +AR+      G
Sbjct: 301 PQKQEGMSYVGLHVPVGRVQAADMFELARLADEYGSG 337


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,070,301
Number of Sequences: 37544
Number of extensions: 355364
Number of successful extensions: 890
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)