Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31624
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   2.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 424 LTSLLYTCCRSPPICIEMMRRWSSSLH-HTRNVLFSLW*MP 305
           + S +   C SPP   E++RR+    +  T ++  S W +P
Sbjct: 364 INSKMIADCESPPAADELLRRFHEIRYMSTIDLRSSYWQIP 404


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 336 LVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIP 455
           ++W  E D  R +S      L+ +++ L  + NEI + +P
Sbjct: 355 MIWSIETDDFRGVSGTKYPILKAIHQTLGGSSNEIVEPVP 394


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 306 GIYHNENKTFLVWCNEEDHLRIISMQMGGD 395
           G  HN    F+ + ++ DH  + S  + GD
Sbjct: 360 GDLHNMGHVFISYIHDPDHRHLESFGVMGD 389


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +2

Query: 398 AAGIQEAGERRQRDREED 451
           A G+Q+AG++ +  ++ED
Sbjct: 67  AGGVQQAGKKPENVKKED 84


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 81  YPFNPCLTESQYK 119
           +PF+PC   + YK
Sbjct: 61  FPFSPCNNTANYK 73


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 79  PSSERPQRTRVETTNSPAGSRLPSV 5
           PS   PQ +    + SPA    P V
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYV 64


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -3

Query: 79  PSSERPQRTRVETTNSPAGSRLPSV 5
           PS   PQ +    + SPA    P V
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYV 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,598
Number of Sequences: 336
Number of extensions: 1925
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)