Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31624
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0040 + 11816056-11819069,11819837-11820428 33 0.14
07_01_0588 + 4370771-4370983,4371069-4371167,4371268-4371399,437... 30 1.3
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 29 1.7
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 29 1.7
01_05_0012 + 17147764-17148141,17148316-17148465,17149360-171497... 29 2.9
10_08_1063 - 22628642-22628716,22628806-22629012,22629325-226294... 28 3.9
07_03_1160 - 24430240-24431268 28 3.9
01_07_0257 - 42343493-42343528,42344215-42344271,42344272-423443... 28 3.9
09_04_0261 + 16207565-16207825,16207935-16208087,16208191-162083... 28 5.1
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 28 5.1
02_03_0175 + 15999507-15999839,16000126-16000407,16000736-16000831 28 5.1
07_03_0600 + 19866757-19867218,19867920-19868429 27 6.8
03_01_0348 + 2739523-2741006,2742046-2742232 27 6.8
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 27 8.9
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 27 8.9
07_03_0439 + 18212584-18213065,18214164-18215010 27 8.9
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 27 8.9
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 92 PLPHRVPVQGD-GGQGLRHPVQPRGRAQGHVLPPHRHV--EGDPAAAHRRPLP 241
P P PV GD G +G+ V +G A+G + P R V G P AA P P
Sbjct: 49 PPPPTAPVAGDDGSKGVEGVVANQGGAEGVAVSPDRSVPLSGGPTAASSLPPP 101
>07_01_0588 +
4370771-4370983,4371069-4371167,4371268-4371399,
4372027-4372092,4372458-4372523,4372633-4372707,
4373423-4373653
Length = 293
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Frame = +2
Query: 122 DGGQGLRHPVQPRGR------AQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPLP 265
DGG+ R PVQ G A V PPH P H +P P +G P
Sbjct: 67 DGGRTDRDPVQLAGLFAPVFGAAAGVQPPHLRAPPPPQVFHAQPKPGEGAMAAP 120
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/69 (33%), Positives = 28/69 (40%)
Frame = +2
Query: 65 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPV 244
P A G+P P + Q Q + P + RG G P H+ P A P P
Sbjct: 28 PPANGLPSTPPRQQAQAQA---QQVGTP-RRRGSKSGSTTPGHQ----TPGVAWPSPYPS 79
Query: 245 QGGRPLPAG 271
G PLPAG
Sbjct: 80 GGASPLPAG 88
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 92 PLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQ 247
P P P G+RHPV R + HV PP P+++ R+ P Q
Sbjct: 48 PAPAPAPAPETHRPGIRHPVPRHHRKRPHVAPP----LPPPSSSERQVAPYQ 95
>01_05_0012 +
17147764-17148141,17148316-17148465,17149360-17149729,
17149898-17150015,17150121-17150226,17150326-17150418,
17150498-17150593,17151169-17151891,17152012-17152160,
17153434-17153520,17153541-17153625
Length = 784
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 368 HHLDADGWRPAAGIQEAGERRQRDRE 445
HH A W P G + GER + +RE
Sbjct: 22 HHASAPPWTPLGGWEGRGERERGERE 47
>10_08_1063 -
22628642-22628716,22628806-22629012,22629325-22629433,
22629547-22629657,22630466-22630513,22630636-22630713,
22632151-22632254,22632360-22632470,22632555-22632791
Length = 359
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 65 PLARGVPLQPLPHRVPVQGDGGQGLRHPVQP 157
P+ RG Q PH++ + D G G+++P P
Sbjct: 322 PMQRGAGAQSHPHQLRRKADQGMGMQNPGYP 352
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +2
Query: 83 PLQPLPHRVPVQGDGGQGLRHPVQ-PRGRAQGHV---LPPHRHVEG-----DPAAAHRRP 235
P+QP P + P G L +P Q P+ G +PP +G +P+ + P
Sbjct: 101 PVQPCPDQPPQPKPDGPPLPNPNQPPQPNPNGPPKPDMPPMPKPDGLPNTYEPSRPDQPP 160
Query: 236 LPVQGGRPLP 265
P+ G PLP
Sbjct: 161 QPISDGPPLP 170
>01_07_0257 -
42343493-42343528,42344215-42344271,42344272-42344316,
42344374-42344518,42344606-42344733,42344939-42345044,
42345113-42345189,42345264-42345361,42345945-42346058,
42346154-42346294,42346418-42346502,42346721-42346849
Length = 386
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 107 VPVQGDGGQGLRHPVQPRGRAQGHVL---PPHRHVEGDPAAAHRRP 235
+P Q QGLR + G H+ PP++ +E D AAA R P
Sbjct: 279 IPSQYKATQGLRPLEKHAGHVASHLRILPPPNKVLENDNAAASRPP 324
>09_04_0261 +
16207565-16207825,16207935-16208087,16208191-16208316,
16208595-16208847,16209303-16209485,16209486-16209582,
16209706-16209769,16209904-16210053,16210215-16210387,
16210497-16210536,16211170-16211223
Length = 517
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 389 WRPAAGIQEAGERRQRDREEDPVLAPRPARLPHVLPDQP 505
WR +A I EAG + ED LA R R+ +P +P
Sbjct: 331 WRVSATINEAGGWKDHTTVEDMDLAVRLLRVNSQVPSKP 369
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 146 PVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLP 241
P+ PR P +RH +G H+ PLP
Sbjct: 339 PLHPRSGGMAPESPTNRHDDGKKKQTHKLPLP 370
>02_03_0175 + 15999507-15999839,16000126-16000407,16000736-16000831
Length = 236
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 125 GGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPLPAG 271
GG G VQ R + + HRH +PA + V GRP AG
Sbjct: 139 GGNGSGGAVQDNDRVERQAVAGHRHRHDNPACGSQ---VVGDGRPSAAG 184
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +2
Query: 83 PLQPLPHRVPVQGDGGQGLRHPVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPL 262
P P P G + P QP + Q LPPH + G P A + P G+P
Sbjct: 17 PPPPQVSGAPPPPHGHYQQQPPPQPYCQQQ-QPLPPHYYQAGPPHAPPPQQPPAMWGQPP 75
Query: 263 P 265
P
Sbjct: 76 P 76
>03_01_0348 + 2739523-2741006,2742046-2742232
Length = 556
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 431 QRDREEDPVLAPRPARLPHVLP 496
+R+RE P+L P P LP VLP
Sbjct: 19 RRNREPLPLLRPPPRPLPRVLP 40
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 98 PHRVPVQGDGGQGLRH--PVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQGGRPL 262
PH + G QGL + PV PR + G V P +HV P + P G+P+
Sbjct: 219 PHTMFASGPPTQGLANGAPV-PRPFSNGAVPPQIQHVRPPPPPMQQFPPMQMNGQPV 274
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/56 (37%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +2
Query: 74 RGVPLQPLPHRVPVQGDGGQGLRHPVQPRG-RAQGHVLPPHRHVEGDPA-AAHRRP 235
RG P R D G G P RG R QG PP G A A++RRP
Sbjct: 301 RGEQSTPRGGRASGSRDRGPGSSRPADARGKRKQGGTPPPSPPRGGGAARASNRRP 356
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/36 (25%), Positives = 19/36 (52%)
Frame = -3
Query: 127 SISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGS 20
++S +WD+ +G ++ P R +TN P+ +
Sbjct: 29 TVSTHWDAASHEARGAAAASSPTSPRAASTNPPSAT 64
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 146 PVQPRGRAQGHVLPPHRHVEGDPAAAHRRPLPVQG 250
P+QP A G+ PPH P ++ P P QG
Sbjct: 2 PMQPPLLAAGNPWPPHHAAAQPPPPSYPPPPPGQG 36
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,618,735
Number of Sequences: 37544
Number of extensions: 279298
Number of successful extensions: 1366
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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