Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31624
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g14710.1 68418.m01725 expressed protein 29 1.4
At4g29460.1 68417.m04205 phospholipase A2 gamma, secretory low m... 29 1.4
At2g29000.1 68415.m03527 leucine-rich repeat family protein / pr... 29 1.4
At1g07560.1 68414.m00809 leucine-rich repeat protein kinase, put... 29 1.9
At1g24706.1 68414.m03104 expressed protein 28 3.2
At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein ... 28 4.3
At1g13310.1 68414.m01545 expressed protein 28 4.3
At2g28970.1 68415.m03524 leucine-rich repeat protein kinase, put... 27 5.7
At1g55580.1 68414.m06361 scarecrow transcription factor family p... 27 5.7
At5g63320.1 68418.m07946 expressed protein 27 7.5
At4g34950.1 68417.m04954 nodulin family protein similar to nodul... 27 7.5
At2g43945.1 68415.m05462 expressed protein 27 9.9
At2g23093.1 68415.m02754 expressed protein 27 9.9
At2g19690.1 68415.m02301 phospholipase A2 beta, secretory low mo... 27 9.9
At1g64570.1 68414.m07319 expressed protein 27 9.9
>At5g14710.1 68418.m01725 expressed protein
Length = 124
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 324 NKTFLVWCNEEDHLRIISMQMG 389
NKT +V C+ EDH+ II+ Q+G
Sbjct: 22 NKTEIVICSYEDHILIIATQIG 43
>At4g29460.1 68417.m04205 phospholipase A2 gamma, secretory low
molecular weight identical to secretory low molecular
weight phospholipase A2 gamma [Arabidopsis thaliana]
GI:26006457; contains INTERPRO domain IPR001211
phospholipase A2
Length = 187
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 408 YKRLVSAVNEIEKKIPFSHHDRLGFLTFCPTNL 506
+K+ VN++ K I S+ +++GF T CP ++
Sbjct: 87 HKQFKRCVNKLSKSIKHSNGEKIGFSTQCPYSI 119
>At2g29000.1 68415.m03527 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 872
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 315 HNENKTFLV-WCNEEDHLRII-SMQMGGDLQQ 404
H+ N LV +CNEEDHL ++ GDL+Q
Sbjct: 617 HHTNLVNLVGYCNEEDHLALVYEYAANGDLKQ 648
>At1g07560.1 68414.m00809 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 856
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 309 IYHNENKTFLVWCNEEDHLRIISMQM-GGDLQQ 404
+YH + + +C+E+DHL +I M GDL++
Sbjct: 606 VYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKK 638
>At1g24706.1 68414.m03104 expressed protein
Length = 1781
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 169 SSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAG 23
S +RLD S + D R KGY +R R RV+ ++ P G
Sbjct: 1461 SVEARLDLNKTVTDDQSTHRDQDRSKDKGYERQDRDHRERVDRSDKPRG 1509
>At4g15080.1 68417.m02317 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 718
Score = 27.9 bits (59), Expect = 4.3
Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 1/118 (0%)
Frame = -3
Query: 370 MRRWSSSLHHTRNVLFSLW*MPRPVGQKRQALAACRKRSPSLNRKWSSMSCCWVSFDMPV 191
M SS H V S G + A AA P LN+ + M +
Sbjct: 500 MSSLSSPSHVHETVTLSPLPQHHTAGHRFTAAAASNSSRPPLNQATNHMIHSTFDEKIMQ 559
Query: 190 RG*NV-PLSSPSRLDRVPETLSSISLYWDSVRQGLKGYPSSERPQRTRVETTNSPAGS 20
+G + PL P+ + + S+ WD P++ RTR + N P S
Sbjct: 560 KGNHADPLLLPAPAASLLRDVRRTSVVWDQEAGRYISVPATTSEPRTRFSSQNQPIPS 617
>At1g13310.1 68414.m01545 expressed protein
Length = 111
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 298 VGQKRQALAACRKRSPSLNRKW 233
VG R+ALAA +K +PS + KW
Sbjct: 27 VGVLRRALAAAKKSTPSKDDKW 48
>At2g28970.1 68415.m03524 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 786
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = +3
Query: 315 HNENKTFLV-WCNEEDHLRIISMQM-GGDLQQ 404
H++N LV +C+E DHL +I M GDL+Q
Sbjct: 531 HHKNLVSLVGYCDEGDHLALIYEYMPNGDLKQ 562
>At1g55580.1 68414.m06361 scarecrow transcription factor family
protein contains Pfam profile PF03514: GRAS family
transcription factor
Length = 445
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 448 FFSISLTALTSLLYTCCRSPPICIEMMRRWSSSLHHTRNVLFS 320
F S S ++ + T PP+CI +S+ HH R +LF+
Sbjct: 5 FKSSSSSSEDATATTTENPPPLCIASSSAATSASHHLRRLLFT 47
>At5g63320.1 68418.m07946 expressed protein
Length = 569
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 149 VQPRGRAQGHVLPPHRHVEGDPAAA 223
V P R++G L PHR DP A+
Sbjct: 338 VHPLDRSEGRTLSPHRKEREDPRAS 362
>At4g34950.1 68417.m04954 nodulin family protein similar to
nodulin-like protein [Arabidopsis thaliana] GI:3329368,
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 567
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +3
Query: 42 VSTRVRCGRSLEGYPFNPCLTESQYKEMEDKVSGTLSSLEGELKGTFYPLTGMSKETQQQ 221
+ ++V + +EG P L E+E+ + G ++ + EL + PL+ +E
Sbjct: 266 IRSKVHDEQDVEGRIDEPLLRSGSEIEVEETIVGAAAAADNELPPSLKPLSNEEEENHGT 325
Query: 222 LI 227
++
Sbjct: 326 IV 327
>At2g43945.1 68415.m05462 expressed protein
Length = 289
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 307 PRPVGQKRQALAACRKRSPSLNRKWSSMSCC 215
P P A ++ R ++P+ R+ SS SCC
Sbjct: 21 PPPPPDSFHAPSSFRSKNPNFKRRLSSSSCC 51
>At2g23093.1 68415.m02754 expressed protein
Length = 449
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 382 CIEMMRRWSSSLHH 341
CI M+RRW S HH
Sbjct: 431 CIYMLRRWGKSPHH 444
>At2g19690.1 68415.m02301 phospholipase A2 beta, secretory low
molecular weight identical to secretory low molecular
weight phospholipase A2 beta [Arabidopsis thaliana]
GI:25992715; contains INTERPRO domain IPR001211
phospholipase A2
Length = 147
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 408 YKRLVSAVNEIEKKIPFSHHDRLGFLTFCP 497
+K+ VN + K I S + ++GF T CP
Sbjct: 89 HKKFQRCVNRLSKAIKQSKNKKVGFSTKCP 118
>At1g64570.1 68414.m07319 expressed protein
Length = 1239
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 75 EGYPFNPCLTESQYKEMEDKVSGTLSSLEGEL 170
E FNP L +S +E +S + +L+GE+
Sbjct: 42 EDVDFNPFLKDSPSREASSSLSSEVETLDGEI 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,440,335
Number of Sequences: 28952
Number of extensions: 184503
Number of successful extensions: 717
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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