Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31620
         (360 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    39   5e-05
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           26   0.49 
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    22   6.1  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 39.1 bits (87), Expect = 5e-05
 Identities = 14/26 (53%), Positives = 23/26 (88%)
 Frame = +2

Query: 233 ESSSTINLTKEKFEVILDVQQFTPDE 310
           +S S +N++K+KF++ LDVQQF+P+E
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEE 28


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 137 SSDPCRSAGPVVWRGARCAPSHPTSRETSLVLSTS 33
           S+DP R++GP  W     +   P+S   +++ ++S
Sbjct: 213 SADPSRNSGPSSWMSGAGSVGGPSSAAAAMLSASS 247


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 194 SYFRPWRASLARQESSSTINLTKEK 268
           S+FR WR  +   +  +TI   KE+
Sbjct: 84  SFFRAWRNCIDEGKGLATIESEKEQ 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,556
Number of Sequences: 2352
Number of extensions: 5189
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)