Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31616
(322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0034 - 228939-229028,229117-229230,229309-229430,229827-23... 75 9e-15
08_02_1145 - 24674319-24674403,24674691-24674746,24674885-246749... 30 0.47
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 29 0.62
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 29 0.81
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 29 1.1
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 28 1.4
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527... 28 1.9
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 27 3.3
11_01_0307 + 2304500-2306023 27 4.3
08_02_0981 + 23266174-23266689,23268389-23268549,23269068-232693... 27 4.3
01_06_1089 - 34451982-34452670,34452755-34452814,34453287-344533... 27 4.3
10_08_0688 - 19907799-19907978,19908077-19908280,19908387-199087... 26 5.7
03_05_0287 + 22759946-22760836 26 5.7
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 26 5.7
07_01_0780 + 6047375-6047494,6047603-6047713,6047804-6047926,604... 26 7.6
>05_01_0034 -
228939-229028,229117-229230,229309-229430,229827-230056,
230458-230537,230641-230859
Length = 284
Score = 75.4 bits (177), Expect = 9e-15
Identities = 32/92 (34%), Positives = 55/92 (59%)
Frame = +1
Query: 43 DQVEAELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLD 222
DQV ++ Y ++Y + +VN E IVGW++TG V+ S++IH++YSRE + P+H+T+D
Sbjct: 72 DQVALDIEYHHNMYASHHKVNPKEVIVGWFSTGFGVSGGSTLIHDFYSREVQSPIHLTVD 131
Query: 223 TSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPV 318
T G ++AY+ L + + F +
Sbjct: 132 TGFTRGDASIKAYISSNLSLGDRHLAAQFQEI 163
>08_02_1145 -
24674319-24674403,24674691-24674746,24674885-24674965,
24675063-24675137,24675418-24675479,24675857-24675950,
24676674-24676762,24676864-24677194
Length = 290
Score = 29.9 bits (64), Expect = 0.47
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +1
Query: 85 ELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSL 231
EL ++V ++GW++TG++V + IH+ PV++ L+ ++
Sbjct: 109 ELYKKVFPDFYVLGWYSTGSDVRDTDMQIHKALMDINESPVYLLLNPAI 157
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 29.5 bits (63), Expect = 0.62
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -2
Query: 162 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 58
G V + +AS+PP FR +++ Q+V I + +KF
Sbjct: 442 GSVNWKLASKPPIKLPFRKLENCNQVVKIGKELKF 476
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 29.1 bits (62), Expect = 0.81
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 162 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 58
G+V + AS+PP FR +++ Q++ I + +KF
Sbjct: 439 GIVNWKQASKPPIIMPFRKVENGNQVIEIGKELKF 473
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 299 PCFPFGTPNGTQTYARKPIRPPASEVSRVTWTG 201
P PF +P + +AR P P +E+S TG
Sbjct: 599 PDSPFASPTKSAGFARDPFAPTEAEISATASTG 631
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -2
Query: 162 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 58
G V + +A+RPP FR +++ Q++ I + +KF
Sbjct: 469 GSVNWKMANRPPIKLPFRKVENCNQVLKIGKELKF 503
>02_01_0706 +
5270233-5270326,5270767-5270914,5271018-5271089,
5271153-5271263,5271363-5271434,5271533-5271604,
5272126-5272197,5272281-5272346,5272426-5272491,
5272601-5272971,5273203-5273456,5273886-5274157,
5274333-5274474,5275174-5275313,5275381-5275537,
5275797-5275965,5276048-5276088
Length = 772
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 AMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTS--LAGGR 243
A+ ++EL R ++S + GW + G + ++ CR+ V L+ S GG
Sbjct: 32 ALGLWELYRTLDSPWQLSGWTSQGGDPCGRGGEQRPWHGVLCRDSSIVALNISGLGVGGW 91
Query: 244 MGL 252
+GL
Sbjct: 92 LGL 94
>08_01_0090 -
649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 148 VTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMG 249
V+ +SS HE++ E E V V+ +S AG R+G
Sbjct: 34 VSYNSSKRHEHFEEEDEEGVVVSATSSSAGHRVG 67
>11_01_0307 + 2304500-2306023
Length = 507
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 156 VGYFIASRPPTNNTFRGIDSSVQLV 82
VGYF RPP ++T RG+ + V
Sbjct: 423 VGYFKVRRPPRSSTRRGMSPGAKAV 447
>08_02_0981 +
23266174-23266689,23268389-23268549,23269068-23269309,
23270180-23270284,23270746-23270902,23271860-23272028,
23272598-23272638,23273151-23273216,23273524-23273779
Length = 570
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 307 TCNLAFHLALLMVHKHMHVNPFDLQPVKCPE*HGQAHGIHGSNTR 173
+C L H+A + K F +P C G+ H SN+R
Sbjct: 416 SCRLCIHVATKIHEKEERTPKFMNRPCSCSSKRGKVRPSHLSNSR 460
>01_06_1089 -
34451982-34452670,34452755-34452814,34453287-34453352,
34454055-34454253,34454470-34454719,34454830-34454898,
34455733-34455804,34456027-34456168,34456544-34457064,
34457166-34457739,34459164-34459269
Length = 915
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 185 PVNAVSLSMLLWTLHWLEVEWVYVHMF 265
P VSL ++W + ++E W Y H +
Sbjct: 630 PYQFVSLFSVIWLISYIENVWTYGHRY 656
>10_08_0688 -
19907799-19907978,19908077-19908280,19908387-19908722,
19908815-19909102,19909196-19909411,19910985-19911311
Length = 516
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 157 HSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVP 273
H +H+YY+ CRE H T GR + Y C P
Sbjct: 59 HVRRLHDYYTALCRE--HTTFRLLATPGRRNI--YTCDP 93
>03_05_0287 + 22759946-22760836
Length = 296
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 100 VNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGL 252
+++ E+ G W T + S + YY + R HV D+ G+ G+
Sbjct: 96 LDTGEAASGGWTTSASTSAPSWSLEGYYLEDDRPAAHVVGDSLYFVGKSGV 146
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 244 FDLQPVKCPE*HGQAHGIHGSNTRV*QRSGWLLH 143
F+L KCPE G A + +R Q+ W+ H
Sbjct: 437 FELMGFKCPERKGVADFLQEVTSRKDQKQYWMQH 470
>07_01_0780 +
6047375-6047494,6047603-6047713,6047804-6047926,
6048035-6048168,6048273-6049551
Length = 588
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 167 LYTSITPVNAVSLSMLLWTL 226
+Y +I+P+ ++ MLLWTL
Sbjct: 13 VYVAISPIQSLCPPMLLWTL 32
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,775,062
Number of Sequences: 37544
Number of extensions: 191084
Number of successful extensions: 481
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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